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Table 1 Demographic data, genotypes, haplotypes and phenotypes of the Central Asian M. tuberculosis complex study population

From: Population structure of drug-resistant Mycobacterium tuberculosis in Central Asia

 

All countries

Uzbekistan

Tajikistan

Kyrgystan

No. strains

%

SD

No. strains

%

SD

No. strains

%

SD

No. strains

%

SD

Samples

607

  

235

38.7

 

206

33.9

 

166

27.3

 

Gender

 Male

 

359

59.1

139

59.1

 

120

58.3

 

100

60.2

 

 Female

 

239

39.4

96

40.9

 

85

41.3

 

58

34.9

 

 Unknown

 

9

 

0

  

1

  

8

  

Age a

 Mean

37.94

 

15.67

42.91

 

16.6

34.53

 

14.36

34.18

 

13.49

Treatment

 New

333

54.9

 

156

66.4

 

93

45.1

 

84

50.6

 

 Previous

221

36.4

 

79

33.6

 

113

54.9

 

29

17.5

 

 Unknown

53

  

0

  

0

  

53

  

MIRU lineage

 Beijing

411

67.7

 

136

57.9

 

154

74.8

 

121

72.9

 

 Dehli/CAS

6

1

 

6

2.6

       

 H37Rv-like

60

9.9

 

31

13.2

 

12

5.8

 

17

10.2

 

 LAM

36

5.9

 

22

9.4

 

5

2.4

 

9

5.4

 

 NEW-1

31

5.1

 

16

6.8

 

10

4.9

 

5

3

 

 URAL

28

4.6

 

10

4.3

 

11

5.3

 

7

4.2

 

 Haarlem

26

4.3

 

7

3

 

13

6.3

 

6

3.6

 

 S-type

3

0.5

 

2

0.9

    

1

0.6

 

 TUR

1

0.2

    

1

0.5

    

 X-type

1

0.2

 

1

0.4

       

 Undefined

4

0.7

 

4

1.7

       

MLVA MtbC15–9

 94–32 (Beijing)

145

23.9

 

58

24.7

 

49

23.8

 

38

22.9

 

 100–32 (Beijing)

70

11.5

 

12

5.1

 

51

24.8

 

7

4.2

 

Resistance pattern

 Pan-susceptible

35

5.8

 

21

8.9

 

2

1

 

12

7.2

 

 Other resistances

279

46

 

127

54

 

66

32

 

86

51.8

 

 MDR-TB

172

28.3

 

47

20

 

71

34.5

 

54

32.5

 

 Pre XDR-TB

94

15.5

 

34

14.5

 

50

24.3

 

10

6

 

 XDR-TB

27

4.4

 

6

2.6

 

17

8.3

 

4

2.4

 
  1. aUnkown for Tajikistan and 23 unkown for Kyrgystan
  2. SD standard deviation