- *Spoligotype defined by SPOTCLUST (probability ≥0.9)
- aThe final identification in family/subfamily was determined by combining results of SITVITWEB (SpolDB4 database), SPOTCLUST and MIRU-VNTRplus (see Additional file 2: Table S1)
- bOne isolate with double allele on ETRA and one isolate with double allele on QUB26 were removed from the analysis
- cOne isolate with double allele on ETRA was removed from the analysis
- dOne isolate with hybridization for all 43 spacers + double alleles on ETRA and Mtub29 was removed from the analysis