Table 2 Distribution of sample type and bacterial isolates from a study of the burden of antimicrobial resistance at HUCSH, southern Ethiopia
Specimen type | Total | |||||||||||
Isolates | Urine | Body Fluids | Stool | Ear Swab | Eye swab | CSF | Blood | Sputum | Puss | Nasal swab | Genital swab | |
S. auraes | 22(8.8) | 6(31.6) | 0 | 5(11.9) | 6(50) | 0 | 19(14.5) | 1(5.9) | 97(51.1) | 0 | 0 | 156(22.5) |
CoNS | 9(3.6) | 0 | 0 | 0 | 0 | 0 | 55(42) | 0 | 0 | 0 | 0 | 64(9.2) |
Enterococcus spp | 17(6.8) | 1(5.3) | 0 | 0 | 1(8.3) | 0 | 10(7.6) | 1(5.9) | 1(0.5) | 0 | 0 | 31(4.5) |
S. pneumonia | 0 | 0 | 0 | 3(7.1) | 0 | 1(14.3) | 3(2.3) | 0 | 0 | 0 | 0 | 7(1) |
Klebsiella spp | 79(31.5) | 5 (26.3) | 0 | 9(21.4) | 2(16.7) | 0 | 26(19.8) | 8(47.1) | 25(13.2) | 0 | 0 | 154(22.2) |
E. coli | 70(27.9) | 2(10.5) | 0 | 9(21.4) | 1(8.3) | 2(28.6) | 5(3.8) | 0 | 26(13.7) | 1 (50) | 0 | 116(16.7) |
Pseudomonas spp | 11(4.4) | 1(5.3) | 0 | 9(21.4) | 0 | 0 | 7(5.3) | 3(17.6) | 15(7.9) | 1 (50) | 0 | 47(6.8) |
Citrobacter spp | 16(6.4) | 3(15.8) | 0 | 2(4.8) | 1(8.3) | 0 | 1(0.8) | 2(11.8) | 7(3.7) | 0 | 0 | 32(4.6) |
Enterobacter spp | 16(6.4) | 0 | 0 | 0 | 1(8.3) | 0 | 2(1.5) | 1(5.9) | 4(2.1) | 0 | 0 | 24(3.5) |
Acinetobacter spp | 4(1.6) | 0 | 0 | 1(2.4) | 0 | 0 | 2(1.5) | 1(5.9) | 10(5.3) | 0 | 0 | 18(2.6) |
Proteus Spp | 6(2.4) | 1(5.3) | 0 | 4(9.5) | 0 | 0 | 0 | 0 | 5(2.6) | 0 | 0 | 16(2.3) |
Shigella spp | 0 | 0 | 12(63.2) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 12(1.7) |
Salmonella spp | 1(0.4) | 0 | 7(36.8) | 0 | 0 | 0 | 1(0.8) | 0 | 0 | 0 | 0 | 9(1.3) |
N. meningitis | 0 | 0 | 0 | 0 | 0 | 4(57.1) | 0 | 0 | 0 | 0 | 0 | 4(0.6) |
N. gonorrhea | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3(100) | 3(0.4) |
Total | 251(36.2) | 19(2.7) | 19(2.7) | 42(6.1) | 12(1.7) | 7(1) | 131(18.9) | 17(2.5) | 190(27.4) | 2(0.3) | 3(0.4) | 693(100) |