Table 1 Results of HEV RNA testing of samples derived from humans, swine and wild boars according to County of origin; number of tested/positive samples (percentages and 95% CI values); typing of recorded genotype 3 strains with subgrouping (SB) results and year of appearance
Human | Swine | Wild boar | Typing results (G3) | Year | |
|---|---|---|---|---|---|
County | RT-PCR | RT-PCR | RT-PCR | ST | |
BB | 1/0 | 25/2 (8.0%; 2.22–24.97%) | n.d. | – | 2010 |
BP | 6/5 | 133/8 (6.0%; 3.1–11.4%) | 143/34 (23.8%; 17.6–31.4%) | a, e, f | 2012, 2013, 2016 |
DN | 8/3 | n.d. | 13/0 | a, f | 2010, 2017 |
I | 3/0 | 2/0 | n.d. | – | – |
K | 3/0 | 58/0 | 72/1 (1.4%; 1.3–7.5%) | 2016 | |
KK | n.d. | 31/3 (9.7%; 3.4–24.9%) | 36/0 | e | 2010 |
KZ | 2/1 | 32/0 | 18/0 | a | 2012 |
M | n.d. | 22/2 (9.5%; 2.7–28.9%) | 70/2 (2.9%; 0.8–9.8%) | c | 2013, 2016 |
OB | 8/0 | 383/72 (18.8%; 15.2–23.0%) | 84/0 | a | 2013 |
PS | 1/0 | 38/0 | 42/0 | – | – |
PG | 4/1 | n.d. | 1/0 | a | 2015 |
SM | 3/0 | 157/55 (37.4%; 30.0–45.5%) | 137/31 (22.6%; 15.8–29.5%) | a | 2010, 2016 |
SD | 1/0 | 22/0 | n.d. | – | – |
SK | 3/0 | 2/1 | n.d. | – | – |
VP | 1/0 | 247/38 (15.4%; 11.4–20.4%) | 30/9 (30.0%; 16.7–47.9%) | e | 2010, 2016 |
VS | 0/0 | 165/34 (20.6%; 15.1–27.4%) | 54/6 (11,1%; 5.2–22.2%) | a, c | 2010, 2013, 2016, |
ZAD | 1/0 | n.d. | n.d. | – | – |
ZG | 128/16 (12.5%; 7.8–19.3%) | 102/9 (8.8%; 4.7–15.9%) | 21/0 | a, c, e, f | 2012, 2013, 2014, 2015, 2016, 2017 |
TOTAL: | 174/26 (14.9%; 10.4–20.1%) | 1419/216 (15.2; 13.5–17.2%) | 720/83 (11.5%; 9.4–14.1%) | – | – |