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Table 3 Spectrum of the identified pathogens from naso-pharyngeal swabs by age-groups

From: Upper respiratory infections in a rural area with reduced malaria transmission in Senegal: a pathogens community study

Age-group

S. pneumo

(n = 185)

S. aureus

(n = 72)

RhinoVirus

(n = 71)

FLu

A/B

(n = 40)

HRSV

A/B

(n = 35)

Corona-virus

(n = 31)

HPIV

(n = 22)

EV

(n = 21)

HBoV

(n = 16)

Othersa

(n = 32)

Total number of pathogens identified

< 1 year (n = 71)

61 ( 85,9 )

16 (22,5)

29 ( 40,8 )

6 (8,5)

14 (19,7)

10 (14,1)

7 (9,9)

5 (7)

4 (5,6)

9 (12,7)

161

1–5 years (n = 123)

104 ( 84,6 )

37 ( 30,1 )

27 (22,0)

27 (22,0)

20 (16,3)

14 (11,4)

11 (8,9)

8 (6,5)

6 (4,9)

16 (13,0)

270

6–15 years (n = 14)

10 ( 71,4 )

7 ( 50,0 )

2 (14,3)

4 (28,6)

0

2 (14,3)

2 (14,3)

3 (21,4)

2 (14,3)

2 (14,3)

34

> 15 years (n = 42)

10 (23,8)

12 ( 28,6 )

13 ( 31,0)

3 (7,1)

1 (2,4)

5 (11,9)

2 (4,8)

5 (11,9)

4 (9,5)

5 (11,9)

60

  1. The number in italic corresponds to percentage (%) among the age-groups. Bold numbers represent the 2 main pathogens identified in the considered age-group. S. pneumo: Streptococcus pneumoniae; H. Saureus: Staphylococcus aureus; Flu A/B: Influenza A/B; HRSV A/B: Human Respiratory Syncytial viruses, HPIV Human ParaInfluenza Virus, EV Enterovirus, BoV Bocavirus
  2. a Others: Human metapneumovirus (HMPV) A/B, H1N1, Mycoplasma pneumoniae, Human Parechovirus (HPeV), Human Adenovirus (HAdv), Chlamydia pneumoniae, Haemophilus influenzae type B