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Table 2 Allelic diversity of 26 different MIRU-VNTR loci among M.tuberculosis strains (n = 668)

From: Role of MIRU-VNTR and spoligotyping in assessing the genetic diversity of Mycobacterium tuberculosis in Henan Province, China

locus HGDI (all strains) HGDI (Beijing family) HGDI (non-Beijing family) Size range observed 24-loci
VNTR
15-loci
VNTR
12-loci
VNTR
10-loci
VNTR
qub-11b 0.767 0.728 0.845 0–11  
mtub-21 0.644 0.564 0.762 1–8  
miru-26 0.616 0.541 0.817 1–12
qub26 0.608 0.566 0.762 1–11  
mtub-04 0.516 0.460 0.690 1–6  
miru-10 0.451 0.357 0.639 1–6
ETRF 0.434 0.358 0.661 0–7    
ETRE 0.430 0.312 0.410 1–5
miru-39 0.394 0.281 0.464 1–8  
ETRA 0.329 0.236 0.565 1–5  
miru-40 0.326 0.243 0.589 0–5  
qub4156 0.322 0.315 0.357 1–8   
mtub-38 0.322 0.110 0.602 0–3     
mtub-39 0.316 0.252 0.523 2–8   
mtub-30 0.308 0.168 0.502 2–5   
ETRB 0.179 0.097 0.468 1–5    
miru-27 0.175 0.117 0.413 1–4   
miru-16 0.172 0.120 0.396 1–5  
ETRD 0.159 0.094 0.436 0–6  
ETRC 0.109 0.097 0.172 2–5   
miru-23 0.109 0.090 0.203 1–6   
mtub29 0.096 0.077 0.187 2–6    
vntr49 0.081 0.080 0.088 1–4    
miru-20 0.030 0.028 0.036 1–2   
miru-2 0.015 0.014 0.018 1–3   
miru-24 0.015 0.007 0.054 1–3   
all 0.998 0.998 0.999