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Table 2 Run-Time of ANI methods vs Mash

From: BMScan: using whole genome similarity to rapidly and accurately identify bacterial meningitis causing species

Method Run-Time of All vs All Comparisons
Seconds Minutes Hours
ANI BLAST 358,625 5977.1 99.6
ANI MUMmer 62,127 1035.4 17.2
Mash 12.7 0.21 .003
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BMC Infectious Diseases

ISSN: 1471-2334

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