agrB | agrD | agrC | agrA | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Strain | CC a | agr group | SNP b (N°) | Non-synonymous predicted result | SNP (N°) | Non-synonymous predicted result | SNP (N°) | Non-synonymous predicted result | SNP (N°) | Non-synonymous predicted result | Reference |
SA_123 | CC45 | 1 | 35 | t329c (110 Ile > Thr); g340t (114 Val > Phe); t346g (116 Ser > Ala); t349a (117 Leu > Ile); gta355ttg (119 Val > Leu); tca361att (121 Ser > Ile); gt364aa (122 Val > Lys); c452t (151 Thr > Ile); c454t (152 Leu > Phe) | 5 | – | 26 | t125g (42 Val > Gly); a752t (251 Tyr > Phe); g1249a (417 Glu > Lys) | 19 | – | NCTC8325 |
SA_520 | CC45 | 1 | 30 | t329c (110 Ile > Thr); g340t (114 Val > Phe); t346g (116 Ser > Ala); t349a (117 Leu > Ile); gta355ttg (119 Val > Leu); tca361att (121 Ser > Ile); gt364aa (122 Val > Lys); c452t (151 Thr > Ile); c454t (152 Leu > Phe) | 5 | – | 25 | t125g (42 Val > Gly); a752t (251 Tyr > Phe); | 19 | – | NCTC8325 |
SA_170015 | CC45 | 1 | 30 | t329c (110 Ile > Thr); g340t (114 Val > Phe); t346g (116 Ser > Ala); t349a (117 Leu > Ile); gta355ttg (119 Val > Leu); tca361att (121 Ser > Ile); gt364aa (122 Val > Lys); c452t (151 Thr > Ile); c454t (152 Leu > Phe) | 5 | – | 26 | t125g (42 Val > Gly); a752t (251 Tyr > Phe); t307c (103; I > T) | 19 | – | NCTC8325 |
SA_180015 | CC8 ST8 | 1 | – | – | – | – | a409 (138Lys/del -1 bp) | 2 | – | NCTC8325 | |
SA_190006 | CC8 ST72 | 1 | – | – | – | – | 24 | t125g (42 Val > Gly); a185c (262 Asp>Ala); c773t (258 Phe > Ile) | 2 | – | NCTC8325 |
SA_70002 | CC8 ST72 | 1 | – | – | – | – | 24 | t125g (42 Val > Gly); a185c (262 Asp>Ala); c773t (258 Phe > Ile) | 2 | – | NCTC8325 |
SA_103 | CC5 | 2 | – | – | – | – | 1 | c287t (96; Ser > Leu) | – | – | N315 |
SA_80004 | CC5 | 2 | – | – | – | – | 1 | t313 (138 Phe/del -1 bp) | – | – | N315 |
SA_170006 | CC5 ST_125 | 2 | – | – | – | – | 1 | t361c (121; I > T) | – | – | N315 |
SA_180009 | CC5 ST_125 | 2 | – | – | – | – | – | – | – | – | N315 |
SA_10009 | CC15 | 2 | 1 | – | – | – | 11 | – | 5 | a407g (136 Lys > Arg) | N315 |
SA_10014 | CC15 | 2 | 1 | – | – | – | 11 | – | 5 | a407g (136 Lys > Arg) | N315 |
SA_80001 | CC30 | 3 | 13 | a145c (49 Ile/Leu); a343t (115 Ile/Leu) | 3 | – | 7 | g163a (55 Gly > Arg) | 12 | – | MW2 |
SA_107 | CC30 | 3 | 13 | a145c (49 Ile/Leu); a343t (115 Ile/Leu) | 3 | – | 7 | g163a (55 Gly > Arg) | 12 | – | MW2 |