Primers | Sequences 5’-3’ | Product size | Target gene | Target Sequences | References |
---|---|---|---|---|---|
HAV-ot-VP1–2- 2848 F | GAGCACTGGATGGTTTGGGW | 466 bp | VP1/VP2A junction | 2848–2867 | Designed in this study |
HAV-ot-VP1–2- 3314 R | WGCAGTCACWCCTCTCCAAG | 3314-3295a | |||
HAV BR5F | TTGTCTGTCACAGAACAATCA | 360 bp | VP1/VP2A junction | 2952–2973 | Reuter et al., 2006 |
HAV newRT | AGC AGT CAC TCC TCT CCA G | 3294–3311b | |||
HA2F | GTTTTGCTCCTCTTTATCATGCTATG | 247 bp | VP1-VP3 capsid | 2165–2191 | Namsai et al., 2011 |
HA1R | GGAAATGTCTCAGGTACTTTCTTTG | 2411–2387c |