Table 1 Salmonella Dublin strains included in this study
From: The invasome of Salmonella Dublin as revealed by whole genome sequencing
Isolate ID | Country (isolation year) | Source | MLST | rMLST | Plasmid replicons profile |
|---|---|---|---|---|---|
WS247 | Ireland (1929) | Human stool | 10 | 53 | incX1 and incFII |
SARB13 | France (1982) | Cattle | 73 | ND | incFII |
92.9894 | Burkina Faso (1992) | Human blood | 10 | 53 | incX1 and incFII |
93.1086 | France (1992) | Cattle | 10 | 53 | incX1, incFIA and incFIB |
93.3170 | Cameron (1993) | Human blood | 10 | 53 | No plasmid replicons |
93.5462 | Mali (1993) | Human blood | 10 | 53 | incX1, incFII and IncQ1 |
93.1557 | Senegal (1993) | Human stool | 10 | 53 | No plasmid replicons |
94.2023 | France (1994) | Cattle | 10 | 53 | incX1 and incFII |
94.8298 | Togo (1994) | Human blood | 10 | 53 | incX1 and incFII |
98.5329 | France (1998) | Human blood | 10 | 53 | incX1 and incFII |
99.5828 | Benin (1999) | Human blood | 2037 | 53 | incX1 and incFII |
99.6207 | Benin (1999) | Human blood | 10 | 53 | incX1 and incFII |
00.8531 | France (2000) | Milk | 10 | 53 | incX1 and incFII |
00.7892 | France (2000) | Shellfish | 10 | 53 | incX1 and incFII |
01.9588 | France (2001) | Human blood | 10 | 53 | incX1 and incFII |
01.9808 | France (2001) | Human blood | 10 | 53 | incX1 and incFII |
02.5213 | Côte d’ivoire (2002) | Human blood | 10 | 53 | incX1 and incFII |
02.1212 | France (2002) | Milk | 10 | 53 | incX1 and incFII |
02.1209 | France (2002) | Pork meat | 10 | 53 | incX1 and incFII |
02.9836 | France (2002) | Human stool | 10 | 53 | incX1 and incFII |
03.2892 | France (2003) | Human urine | 10 | 53 | incX1 and incFII |
04.4663 | Cameron (2004) | Human blood | 73 | ND | incX1 and incFII |
05.1078 | France (2005) | Human blood | 10 | 53 | incX1 and incFII |
05.6136 | Mali (2005) | Human blood | 10 | 53 | incX1 and incFII |
05.5914 | Togo (2005) | Human stool | 10 | 53 | incX1 and incFII |
05.2324 | Peru (2005) | Human blood | 10 | 53 | incX1, incFII and IncQ1 |
08.6645 | Congo (2008) | Human blood | 10 | 53 | incX1 and incFII |
09.2054 | France (2009) | Human stool | 10 | 53 | incX1 and incFII |
201,001,882 | France (2010) | Human blood | 10 | 53 | incX1 and incFII |
201,005,507 | Nigeria (2010) | Human blood | 10 | 53 | No plasmid replicons |
201,200,014 | France (2012) | Human blood | 10 | 53 | incX1 and incFII |
201,200,083 | France (2012) | Human urine | 10 | 53 | incX1 and incFII |
201,208,251 | France (2012) | Human pus | 73 | ND | incX1 and incFII |
201,200,586 | Maurice island (2012) | Human stool | 10 | 53 | incX1 and incFII |
201,208,243 | Thailand (2012) | Human blood | 10 | 53 | incX1 and incFII |