Fig. 2
Major structural features of plasmid pC629 compared with several plasmids from NCBI. a. Major structural features of plasmid pC629 compared with plasmids pC06114_1, pNDM-CIT, and pCC1409-1 identified in Escherichia coli, Citrobacter freundii, and Klebsiella pneumoniae, respectively. ORFs are shown as arrowheads (blue arrows, IS26, ISCR1, and tnpM; red arrows, antibiotic resistance genes; pink arrows, membrane protein, MP; white arrows, hypothetical proteins, HP; green arrows, integrase related genes –see the key to the right hand side of the panel). b. Major structural features of plasmid pC629 compared with plasmids pS414, pSJ_255, pSTA155, p112298-KPC, pEK499, and pUUH239.2 identified in Salmonella Indiana, Escherichia coli, Salmonella Indiana, Citrobacter freundii, Escherichia coli and Klebsiella pneumoniae, respectively. ORFs are shown with arrowheads (blue arrows, IS26, IS6100 and other transposase related genes; red arrows, antibiotic resistance genes; pink arrows, membrane protein, MP; white arrows, hypothetical proteins, HP; green arrows, integrase related genes –see the key to the right hand side of the panel). c. Major structural features of plasmid pC629 plasmid compared with plasmids pHNSHP45-2, pSJ_255, and p42-2 all identified in Escherichia coli. ORFs are shown with arrows (blue arrows, IS26; red arrows, antibiotic resistance genes –see the key to the right hand side of the panel). d. Major structural features of plasmid pC629 compared with plasmids p397Kp, pCT-KPC, and p1205p1 identified in Klebsiella pneumoniae, Klebsiella pneumoniae, and Shigella flexneri, respectively. ORFs are shown with arrows (blue arrows, IS26; red arrows, antibiotic resistance genes; white arrows, hypothetical proteins, HP –see the key to the right hand side of the panel). e. Major structural features of plasmid pC629 plasmid compared with plasmids pGD0503Z13, pHK0653, and pCN061p6 identified in Escherichia coli, Salmonella species and Escherichia coli, respectively. ORFs are shown with arrows (blue arrows, IS26; red arrows, antibiotic resistance genes; white arrows, hypothetical proteins, HP –see the key to the right hand side of the panel)