BMC Infectious Diseases

Table 2 Specificities of 13 type-specific probes employed in multiplex HPyV genotyping

From: Multiplex detection in tonsillar tissue of all known human polyomaviruses

Target sequence	HPyV type-specific probe (MFI)
Target sequence	BKPyV	JCPyV	KIPyV	WUPyV	MCPyV	HPyV6	HPyV7	TSPyV	HPyV9	HPyV10	HPyV11	HPyV12	HPyV13
BKPyV	2105	43	35	36	33	54	42	27	34	34	44	35	19
JCPyV	39	1145	32	32	32	34	34	24	39	28	47	32	20
KIPyV	49	48	2522	45	42	43	43	38	48	44	59	47	17
WUPyV	33	36	29	5704	31	31	65	18	35	26	43	29	19
MCPyV	46	46	37	38	2736	45	41	31	40	37	49	39	21
HPyV6	38	38	34	32	33	3196	35	30	34	31	44	35	23
HPyV7	43	46	38	52	35	42	2574	29	41	41	51	37	18
TSPyV	52	52	45	74	42	46	64	2894	47	42	58	47	19
HPyV9	50	48	44	40	47	47	39	29	1388	39	54	49	18
HPyV10	38	36	33	32	34	36	32	21	33	5116	47	31	24
HPyV11	47	56	42	51	45	66	61	57	59	58	1782	66	17
HPyV12	55	50	42	48	45	50	46	38	46	39	61	681	20
HPyV13	39	42	36	36	37	39	40	27	40	35	48	37	2327
Mix HPyVs	745	1367	1518	2884	1511	1586	1125	733	603	2639	612	326	1631
cutoff	85	81	77	81	77	83	77	75	81	72	107	73	127

Each line represents a single well with each HPyV plasmid (10⁵ copies/μL) or plasmid mix hybridized to a mixture of 13 distinct beads

Back to article page

ISSN: 1471-2334

Contact us

Submission enquiries: bmcinfectiousdiseases@biomedcentral.com
General enquiries: ORSupport@springernature.com