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Table 2 Polymorphism and divergence data

From: Valine/isoleucine variants drive selective pressure in the VP1 sequence of EV-A71 enteroviruses

  

N

Hp

Nt

S

η

Pa

Si

θ

MC

Na

Ns

Ka/Ks

Cluster 1

56

43

561

67

70

48

19

14.58

64

6

58

0.053

 

Cluster 2

23

15

561

15

15

9

6

4.06

15

6

9

0.107

 

Cluster 3

12

10

561

19

19

11

8

6.92

16

0

16

0.029

 

Cluster 4

17

13

561

109

113

57

52

32.24

110

5

105

0.011

 

Total

 

108

81

561

148

162

128

20

28.16

147

9

138

0.019

  1. N Number of sequences
  2. Hp Number of haplotypes
  3. Nt Sequence size in nucleotides
  4. S Number of mutated sites
  5. η Number of mutations
  6. Pa Number of parsimony informative sites
  7. Si Number of singletons
  8. θ Number segregating sites (per sequence from S)
  9. MC Number of mutated codons
  10. Na Number of non-synonymous mutations
  11. Ns Number of synonymous mutations
  12. Ka/Ks Ka/Ks ratio