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Table 3 Performance of direct sequencing in detecting of resistance of three antitubercular drugs

From: Early detection of multidrug- and pre-extensively drug-resistant tuberculosis from smear-positive sputum by direct sequencing

Drugs

Gene targets

No.(%) of strains/total no. of strains

%

sensitivity

%

specificity

Phenotypically resistant

Phenotypically resistant with mutations

Phenotypically susceptible with mutations

rifampicin

rpoB

65/186(34.95)

63/65(96.92)

2/121(1.65)

96.92

98.35

isoniazid

katG, inhA promoter

61/186(32.80)

53/61(86.89)

1/125(0.80)

86.89

99.20

ofloxacin

gyrA

40/186(21.51)

31/40(77.50)

4/146(2.74)

77.50

97.26