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Table 2 Primers for the ZIKV RNA ChIP assays

From: Determination of the Cell Permissiveness Spectrum, Mode of RNA Replication, and RNA-Protein Interaction of Zika Virus

Sequence

Start nt

End nt

Forward AGTTGTTGATCTGTGTGAGTCAG

1

23

Reverse GCATATTGACAATCCGGAATCCT

133

156

Forward GATTCCGGATTGTCAATATGCTAAA

135

160

Reverse GTGATGGCTTGATTGCTGTAAA

272

294

Forward AGCCATCACTGGGCCTT

285

302

Reverse TAGTCAGCAGGAGGCCAAT

443

462

Forward TCCTGCTGACTACAGCCAT

450

469

Reverse TGCCCGAGGTCCATGAT

584

601

Forward CAAGTGCCACGTACAGATCAT

568

589

Reverse TAGATCGCCGTGCCTCA

730

747

Forward GCACGGCGATCTAGAAGAG

734

753

Reverse AATGGCAACGGCCACTA

882

899

Forward TAGTGGCCGTTGCCATTG

882

900

Reverse AAGACAACATCAACCCAGGTC

1030

1051

Forward TGGGTACCAACTGGGAGAA

10,031

10,050

Reverse TCCTAGATAGGGAATGTCTGTCC

10,170

10,193

Forward AAATGGACAGACATTCCCTATCT

10,166

10,189

Reverse TAGCGGACTTGGGTGGATA

10,323

10,342

Forward TATCCACCCAAGTCCGCTAC

10,323

10,343

Reverse CGTTCTCGGCCTGACTATGA

10,475

10,495

Forward CTCATAGTCAGGCCGAGAAC

10,474

10,494

Reverse CACAGCTAGTCTCCAGTTCAG

10,623

10,644

Forward GAACTGGAGACTAGCTGTGAAT

10,625

10,646

Reverse GCTGTTCGGCGATCTGT

10,760

10,776

  1. Based on the nt sequence of MR766