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Table 3 HPV genotyping of discordant samples with the LiPA Extra test

From: Study-based evaluation of the Abbott RealTime High Risk HPV test in comparison to the HC2 HR HPV test in women aged ≥30 years using residual LBC ThinPrep specimens

HPV Genotype

HPV classification

HC2-ve RT + ve (N)

RT-ve HC2 + ve (N)

Histology CIN3+ (HC2-ve/RT-ve)

HPV 16a

HR

2

1

0

HPV 18a

HR

0

3

0

HPV 31a

HR

0

6

0/2

HPV 33a

HR

0

0

0

HPV 39a

HR

0

1

0

HPV 45a

HR

2

0

0

HPV 51a

HR

4

3

0

HPV 52a

HR

0

4

0

HPV 56a

HR

0

1

0

HPV 58a

HR

0

1

0

HPV 59a

HR

1

0

0

HPV 68a

HR

0

0

0

HPV 53

Intermediate

0

11

0

HPV 66b

Intermediate

0

1

0

HPV 70

Intermediate

0

2

0

HPV 6

LR

0

1

0

HPV 54

LR

0

1

0

HPV 74

 

1

1

0

HPVX

 

0

2

0

HPV DNA -ve

 

7

5

0

no result

(sample failed)

 

1

3

0

Total

 

18

47

0/2

  1. a HC2 and RT target types; b RT target type; HC2, Digene Hybrid Capture 2 High-Risk HPV DNA test, RT, Abbott RealTime High Risk HPV Test, HPVX HPV DNA was detected by LiPA, but could not be correlated to a specific type; HR High-risk, LR Low-risk; +ve: positive; −ve: negative; +: and worse