Table 4 Phylogenetic group assignment of the 202 E. coli strains subdivided based on the detection or not of ESBL genes
ESBL-Positive (n = 121) | ESBL-Negative (n = 81) | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | B1 | B2 | C | Clade I | D | F | Unknown | ST131 | A | B1 | B2 | C | Clade I | D | F | Unknown | ST131 | |
Hospital (number of samples) | ||||||||||||||||||
CHU-YO (55) | ||||||||||||||||||
Outpatients (16) | 0 | 0 | 3 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 6 | 0 | 0 | 0 | 4 | 0 |
Inpatients (39) | 9 | 2 | 4 | 6 | 0 | 5 | 6 | 0 | 3 | 0 | 0 | 3 | 0 | 0 | 2 | 0 | 2 | 1 |
CHU-SS (90) | ||||||||||||||||||
Outpatients (59) | 6 | 1 | 11 | 4 | 2 | 8 | 1 | 0 | 8 | 7 | 2 | 7 | 4 | 1 | 3 | 2 | 0 | 4 |
Inpatients (31) | 7 | 1 | 5 | 1 | 0 | 3 | 1 | 1 | 4 | 2 | 2 | 1 | 1 | 1 | 0 | 1 | 3 | 0 |
CHUP-CDG (57) | ||||||||||||||||||
Outpatients (20) | 0 | 1 | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 7 | 2 | 3 | 0 | 0 | 1 | 0 | 1 | 1 |
Inpatients (37) | 9 | 2 | 3 | 0 | 3 | 6 | 0 | 3 | 0 | 2 | 2 | 2 | 0 | 0 | 5 | 0 | 1 | 0 |