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Table 4 Phylogenetic group assignment of the 202 E. coli strains subdivided based on the detection or not of ESBL genes

From: High prevalence of extended-spectrum ß-lactamase producing enterobacteriaceae among clinical isolates in Burkina Faso

ESBL-Positive (n = 121) ESBL-Negative (n = 81)
  A B1 B2 C Clade I D F Unknown ST131 A B1 B2 C Clade I D F Unknown ST131
Hospital (number of samples)
 CHU-YO (55)
  Outpatients (16) 0 0 3 0 0 2 0 0 1 0 0 1 6 0 0 0 4 0
  Inpatients (39) 9 2 4 6 0 5 6 0 3 0 0 3 0 0 2 0 2 1
 CHU-SS (90)                   
  Outpatients (59) 6 1 11 4 2 8 1 0 8 7 2 7 4 1 3 2 0 4
  Inpatients (31) 7 1 5 1 0 3 1 1 4 2 2 1 1 1 0 1 3 0
 CHUP-CDG (57)                   
  Outpatients (20) 0 1 0 0 0 2 2 1 0 7 2 3 0 0 1 0 1 1
  Inpatients (37) 9 2 3 0 3 6 0 3 0 2 2 2 0 0 5 0 1 0