Table 5 Virulence factors in relation to ST and phylogenetic group
Isolate | Sequence type | Phylogroup | Virulence gene |
|---|---|---|---|
RA005 | ST-648 | D | iha, sat, Ipfa, nfaE, gad |
RA023 | ST-4450 | A | gad, IpfA |
RA025 | ST-4450 | A | gad, IpfA |
RA034 | ST-648 | D | iha, sat, Ipfa, nfaE |
RA043 | ST-2852 | B1 | gad, IpfA |
RA045 | ST-648 | D | iha, sat, Ipfa, nfaE |
RA051 | ST-617 | A | gad, iss |
RA061 | ST-38 | D | gad, iss |
RA073 | ST-131 | B2 | iha, sat, Ipfa, nfaE, gad, senB |
RA085 | ST-2852 | B1 | gad, IpfA |
RA102 | ST-38 | D | gad, iss |
RA105 | ST-617 | A | gad, iss |
RA116 | ST-131 | B2 | iha, sat, Ipfa, nfaE, gad, senB |
RA134 | ST-205 | B1 | gad, IpfA |
RA166 | ST-131 | B2 | iha, sat, cnf1, iss, gad, senB |
RA173 | ST-131 | B2 | iha, sat, Ipfa, nfaE, gad, ireA |
RA175 | ST-131 | B2 | iha, sat, iss, nfaE, gad, ireA |
RA176 | ST-38 | D | gad, iss |
RA194 | ST-617 | A | gad, iss |
RA195 | ST-38 | D | gad, iss |
RA217 | ST-44 | A | gad, iss |
RA218 | ST-44 | A | gad, iss |
RA228 | ST-38 | D | gad, iss |
RA246 | ST-131 | B2 | nfaE, Iha, sat, gad, iss |
RA256 | ST-2852 | B1 | gad, IpfA |