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Table 3 Mean pairwise nucleotide distances between genotype D subgenotypes and Kenyan complete genome genotype D sequences

From: Hepatitis B infection is highly prevalent among patients presenting with jaundice in Kenya

   Genotype D subgenotypea
  D1 D2 D3 D4 D5 D6 D-E
Genotype D full genome sequences ELD401 0.0612 0.0648 0.0613 0.0534 0.0688 0.0494 0.0488
ELD416 0.0405 0.0443 0.0382 0.0315 0.0467 0.0302 0.0329
ELD422 0.0430 0.0481 0.0425 0.0332 0.0512 0.0317 0.0333
ELD428 0.0543 0.0577 0.0535 0.0452 0.0612 0.0412 0.0423
ELD429 0.0412 0.0450 0.0389 0.0322 0.0474 0.0308 0.0335
KN109 0.0505 0.0534 0.0514 0.0445 0.0586 0.0389 0.0467
  1. aGenBank reference sequences used were as follows: D1 (AF280817, AJ344116, AF151735, GU456684, AB104711), D2 (AY090453, X72702, GQ477453, JF754597, AB078032), D3 (U95551, AY233296, AJ627217, EU921419, AB493846), D4 (HQ700500, AB033559, AB048703, FJ692533, HE974378), D5 (GQ205377, GQ205385, GQ205389, AB033558, GQ205382), D6 (FJ904409, FJ904447, FJ904403, FJ904433, FJ904438, FJ904410, FJ904395, FJ904442, KF170740, JQ927384), D-E recombinant (FN594771, FN594769, FN594770); values in bold represent nucleotide diversity >4 %