Table 2 IID causing enteropathogens (n = 19) included in PCR testing for microbiological study
From: Design of the PROUD study: PCR faeces testing in outpatients with diarrhoea
Enteropathogen | PCR assay | PCR system | Positive test |
|---|---|---|---|
Campylobacter spp., Salmonella spp., Shigella spp., Plesiomonas spp., Yersinia spp. | TIB MOLBIOL LightMix® Modular Gastro Bacteria | LightCycler 480 II | Ct <45 |
Clostridium difficile | R-Biopharm RIDA®GENE Clostridium difficile Toxin A/B | LightCycler 480 II | Ct <45 |
EHEC/STEC, EPEC | R-Biopharm RIDA®GENE E.Coli Stool Panel 1 | LightCycler 480 II | Ct <45 |
Blastocystis hominis, Cryptosporidium spp., Dientamoeba fragilis, Entamoeba histolytica, Giardia spp. | TIB MOLBIOL LightMix® Modular Gastro Parasites | LightCycler 480 II | Ct <45 |
Adenovirus 40/41, Astrovirus, Norovirus, Rotavirus, Sapovirus | Laboratory Developed Test | ABI 7500 | Ct <45 |