Table 2 Details of M. tb spoligotyping results divided into each region in Indonesia
GenotypeMtb | Western region freq (%) | Central region freq (%) | Eastern region freq (%) | Total |
|---|---|---|---|---|
Beijing strain (fam. I) | 86 (29.3) | 6 (8.3) | 1(2.6) | 93 |
H genotype (fam. A) | 23 (7.8) | 9 (12.5) | 2 (5.3) | 34 |
LAM genotype (fam. D) | 32 (10.9) | 10 (13.9) | 8 (21.1) | 50 |
EA genotype (fam. F) | 62 (21.1) | 11 (15.3) | 10 (26.3) | 83 |
T genotype (fam. C) | 20 (6.8) | 4 (5.6) | 8 (21.1) | 32 |
U genotype (fam. G and H) | 21 (6.8) | 9 (12.5) | 2 (5.3) | 32 |
MANU1 genotype (fam. others) | 6 (2) | - | - | 6 |
MANU2 genotype (fam. others) | 3 (1) | 2 (2.8) | - | 5 |
X1 genotype(fam. B) | 6 (2) | - | - | 6 |
CAS genotype (fam. others) | 3 (1) | - | - | 3 |
PINI genotype (fam. others) | - | - | 1 (2.6) | 1 |
Africanum genotype (fam. others) | - | 1 (1.4) | - | 1 |
Orphan | 31 (10.5) | 20 (27.8) | 6 (15.8) | 57 |
H37Rv | 1 (0.3) | - | - | 1 |
TOTAL | 294 | 72 | 38 | 404 |