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Table 2 Details of M. tb spoligotyping results divided into each region in Indonesia

From: Molecular epidemiology study of Mycobacterium tuberculosis and its susceptibility to anti-tuberculosis drugs in Indonesia

GenotypeMtb Western region freq (%) Central region freq (%) Eastern region freq (%) Total
Beijing strain (fam. I) 86 (29.3) 6 (8.3) 1(2.6) 93
H genotype (fam. A) 23 (7.8) 9 (12.5) 2 (5.3) 34
LAM genotype (fam. D) 32 (10.9) 10 (13.9) 8 (21.1) 50
EA genotype (fam. F) 62 (21.1) 11 (15.3) 10 (26.3) 83
T genotype (fam. C) 20 (6.8) 4 (5.6) 8 (21.1) 32
U genotype (fam. G and H) 21 (6.8) 9 (12.5) 2 (5.3) 32
MANU1 genotype (fam. others) 6 (2) - - 6
MANU2 genotype (fam. others) 3 (1) 2 (2.8) - 5
X1 genotype(fam. B) 6 (2) - - 6
CAS genotype (fam. others) 3 (1) - - 3
PINI genotype (fam. others) - - 1 (2.6) 1
Africanum genotype (fam. others) - 1 (1.4) - 1
Orphan 31 (10.5) 20 (27.8) 6 (15.8) 57
H37Rv 1 (0.3) - - 1
TOTAL 294 72 38 404