Table 1 Micro-organism names, strains and relevant NCBI references to sequences
Bacteria | Disease | Strain | NCBI reference sequence |
|---|---|---|---|
H. ducreyi | Chancroid | HP35000 | NC_017456.1 |
C. trachomatis | Chlamydia | E/11023 | NC_017431.1 |
C. trachomatis | Chlamydia | E/150 | NC_017439.1 |
C. trachomatis | Chlamydia | E/SW3 | NC_017952.1 |
C. trachomatis | LGV | L2b/UCH-1 | NC_010280.2 |
N. gonorrhoeae | Gonorrhea | FA 1090 | NC_002946.2 |
N. gonorrhoeae | Gonorrhea | NCCP11945 | NC_011035.1 |
N. gonorrhoeae | Gonorrhea | TCDC-NG08107 | NC_017511.1 |
T. pallidum | Syphilis | DAL-1 | NC_016844.1 |
T. pallidum | Syphilis | SS14 | NC_010741.1 |
T. pallidum | Syphilis | Chicago | NC_017268.1 |
T. pallidum | Syphilis | Mexico A | NC_018722.1 |
M. genitalium | Non-gonococcal urethritis | G37 | NC_017456.1 |
M. genitalium | Non-gonococcal urethritis | M2288 | NC_018498.1 |
M. genitalium | Non-gonococcal urethritis | M2321 | NC_018495.1 |
M. genitalium | Non-gonococcal urethritis | M6282 | NC_018496.1 |
M. genitalium | Non-gonococcal urethritis | M6320 | NC_018497.1 |
G. vaginalis | Bacterial vaginosis | 409-05 | NC_013721.1 |
G. vaginalis | Bacterial vaginosis | ATCC 14019 | NC_014644.1 |
G. vaginalis | Bacterial vaginosis | HMP 9231 | NC_017456.1 |
M. hominis | Bacterial vaginosis | ATCC 23144 | NC_013511.1 |
U. urealyticum | Bacterial vaginosis | ATCC 33699 | NC_011374.1 |
E. coli | - | ABU 83972 | NC_017631.1 |
L. crispatus | - | ST1 | NC_014106.1 |
L. gasseri | - | ATCC 33323 | NC_008530.1 |