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Table 4 Distribution of co-infections of respiratory pathogens in SARI patients using multiplex PCR

From: Identification of viral and bacterial pathogens from hospitalized children with severe acute respiratory illness in Lusaka, Zambia, 2011–2012: a cross-sectional study

  HRV HPIV 1 HPIV 3 Cor43 RSVA/B CMV HADV HPIV 4 EV/PV COR 229 HMPV AB COR 63 COR HKU HBoV S.aurs C.pneu. S.pneu HIB PCP Legio. Salm. K.pneu. Morax. Haeinf. Bord.
HRV X 0 0 0 0 9 0 0 1 0 0 0 0 1 2 9 1 3 0 2 0 3 7 6 1
HPIV 1 - X 0 1 1 3 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 2 3 2 0
HPIV 3 - - X 0 0 3 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 1 2 0 0
Cor43 - - - X 0 4 0 0 0 0 0 1 0 1 2 0 3 0 1 2 0 1 3 3 0
RSVA/B - - -   X 10 2 0 0 0 0 1 0 2 4 0 9 2 2 4 0 4 8 10 0
CMV - - - - - X 12 0 3 0 14 4 0 14 25 1 71 13 5 22 1 31 59 50 3
HADV - - - - - - X 0 1 0 0 0 0 3 5 0 11 3 0 3 0 5 13 10 1
HPIV 4 - - - - - - - X 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
EV/PV - - - - - - -   X 0 1 0 0 0 0 0 4 0 0 0 0 0 2 0 0
COR 229 - - - - - - - - - X - 0 0 0 0 0 0 0 0 0 0 0 0 0 0
HMPV AB - - - - - - - - - - X 0 0 2 2 5 4 1 1 1 0 5 4 1 0
COR 63 - - - - - - - - - - - X 0 0 3 0 3 2 0 1 0 1 3 3 0
COR HKU - - - - - - - - - - - - X 0 0 0 0 0 0 0 0 0 0 0 0
HBoV - - - - - - - - - - - - - X 3 0 13 3 1 5 0 5 12 11 0
S.aurs - - - - - - - - - - - - - - X 0 21 1 6 7 0 10 21 18 1
C. pneu. - - - - - - - - - - - - - - - X 2 0 0 0 0 1 1 1 0
S.pneu - - - - - - - - - - - - - - - - X 15 7 19 1 22 64 54 3
HIB - - - - - - - - - - - - - - - - - X 0 7 1 6 15 18 0
PCP - - - - - - - - - - - - - - - - - - X 1 1 7 6 5 2
Legio. - - - - - - - - - - - - - - - - - - - X 0 5 14 17 0
Salm. - - - - - - - - - - - - - - - - - - - - X 2 2 0 1
K.pneu. - - - - - - - - - - - - - - - - - - - - - X 29 21 1
Morax. - - - - - - - - - - - - - - - - - - - - - - X 50 3
Haeinf. - - - - - - - - - - - - - - - - - - - - - - - X 1
Bord. - - - - - - - - - - - - - - - - - - - - - - - - X