Skip to main content

Table 2 Allele frequencies and genotype distributions of miR-146a C > G, miR-149 T > C, miR-196a2 T > C and miR-499 T > C SNPs in the Chinese Uygur population

From: Association of the miR-146a, miR-149, miR-196a2 and miR-499 polymorphisms with susceptibility to pulmonary tuberculosis in the Chinese Uygur, Kazak and Southern Han populations

SNP sites

Controls N (Freq)

Patients N (Freq)

Pvalue

OR (95% CI)

miR-146a C > G Allele

G

441(0.611)

358(0.622)

0.693

1 0.96(0.76-1.20)

C

281(0.389)

218(0.378)

Genotype

GG

131(0.368)

106(0.368)

 

1

GC

179(0.496)

146(0.507)

0.963

1.00(0.72-1.41)

CC

51(0.141)

36(0.125)

0.591

0.87(0.53-1.43)

 

HWE(P)

0.415

0.188

  

miR-149 T > C Allele

C

342(0.521)

274(0.511)

0.727

1 1.04(0.83-1.31)

T

314(0.479)

262(0.489)

Genotype

CC

89(0.271)

75(0.280)

 

1

TC

164(0.500)

124(0.164)

0.581

0.89(0.61-1.32)

TT

75(0.229)

69(0.257)

0.701

1.09(0.69-1.71)

 

HWE(P)

0.974

0.225

  

miR-196a2 T > C Allele

C

378(0.531)

286(0.498)

0.244

1 1.14(0.91-1.42)

T

334(0.469)

288(0.502)

Genotype

CC

96(0.270)

67(0.233)

 

1

TC

186(0.522)

152(0.530)

0.414

1.17(0.80-1.71)

TT

74(0.208)

68(0.237)

0.234

1.32(0.84-2.07)

 

HWE(P)

0.356

0.316

  

miR-499 T > C Allele

T

421(0.829)

455(0.756)

0.003

1 1.56(1.16-2.10)

C

87(0.171)

147(0.244)

Genotype

TT

171(0.673)

176(0.585)

 

1

TC

79(0.311)

103(0.342)

0.199

1.27(0.88-1.82)

CC

4(0.016)

22(0.073)

0.001

5.34(1.80-15.83)

 

HWE(P)

0.127

0.205

  
  1. SNP: single nucleotide polymorphism, HWE: Hardy-Weinberg equilibrium, OR: odds ratio, CI: confidence interval, N: number of alleles, Freq: frequency. All of the miRNA SNPs were in HWE.