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Table 1 Primers for porA , fetA and fHbp PCR reactions

From: Neisseria meningitidis porA, fetA and fHbp gene distribution in Western Australia 2000 to 2011

Primer

Sequence (5′-3′)

porA 1st round forward primer

5′-AAA CTT ACC GCC CTC GTA-3′

porA 1st round reverse primer

5′-TTA GAA TTT GTG GCG CAA ACC GAC-3′

porA 2nd round forward primera

5′-CCG CAC TGC CGC TTG CGG-3′

porA 2nd round reverse primera

5′-CGC ATA TTT AAA GGC ATA-3′

fetA (segment 1) 1st round forward primerb

5′-CGG CGC MAG CGT ATT CGG-3′

fetA (segment 1) 1st round reverse primerc

5′-GCG GTT TGA TTT CCT GAT GG-3′

fetA (segment 1) 2nd round forward primera

5′-TTR TTC TCT TAC AAC CGC ARC-3′

fetA (segment 1) 2nd round reverse primera,c

5′-GCG GTT TGA TTT CCT GAT GG-3′

fetA (segment 2) 1st round forward primer

5′-GCC TTG CCG AAC AAA CYC-3′

fetA (segment 2) 1st round reverse primer

5′-CGC CCA ATT CGT AAC CGT-3′

fet A (segment 2) 2nd round forward primera

5′-TCA ACT ACC GCC ATC AGG A-3′

fetA (segment 2) 2nd round reverse primera

5′-TTT GAT GGT YTG CCA RAA GTA GC-3′

fHbp 1st round foward primer

5′-GTG AAY CGA ACT RCC TTC TRY-3′

fHbp 1st and 2nd round reverse primera

5′-TGT TCR ATT TTG CCG TRY-3′

5′-TGG TIT TTT TYA TCC GGC TTR-3′

fHbp 2nd round forward primera

5′-CCC TGA TTC TGA CCG CCT G-3′

  1. aSecond round primers also used as sequencing primers.
  2. bS1 primer from Thompson et al. [12].
  3. cS4 primer from Thompson et al. [12].