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Table 1 The primers, nucleotide numbers and the thercycling conditions

From: The first clinical case due to AP92 like strain of Crimean-Congo Hemorrhagic Fever virus and a field survey

 

Sequence

Position

Thermalcycling conditions

 

Amplicon lengths (bp)

Eecf-F1

ttg tgt tcc aga tgg cca gc

(49–68)*

95'C

2 min × 1

First round: 307

Eecf-R1

ctt aag gct gcc gtg ttt gc

(356–337)*

95'C

30 sec

 

Eecf-F2

gaa gca acc aar ttc tgt gc

(115–134)*

60'C (57'C)#

1 min × 44

 

Eecf-R2

aaa cct atg tcc ttc ctc c

(326–308)*

72'C

2 min

Second round: 211

   

72'C

10 min × 1

 

Gre-F1

aat gtg ccg aac ttg gac ag

(170–189)**

95'C

2 min × 1

First round: 593

Gre-R1

tgc gac aag tgc aat ccc g

(751–733)**

95'C

30 sec

 

Gre-F2

atc aga tgg cca gtg caa cc

(198–217)**

57'C

1 min × 44

 

Gre-R2

act ccc tgc acc act caa tg

(665–646)**

72'C

2 min

Second round: 469

   

72'C

10 min × 1

 
  1. * According to the Hodhza strain (AY223475)
  2. ** According to the AP92 strain (U04958)
  3. # In the second round