Table 1 Primers and probes used in this study

CT-F: GGT TTC GGC GGA GAT CCT

CT

omp1

all (I)

(AF063200)

124–193

CT-R1: AGT AAC CAA CAC GCA TGC TGA T

CT-R2: AGT AAC CCA TAC GCA TGC TGA T

CT-P: FAM-CTTGCACCACTTGGTGTGACGC-TAMRA

IK_CT

ninja

-

AB110070

2079–2051

Dros-P: TexRed-ATG CCT CTT CAC ATT GCT CCA CCT TTC CT-BHQ1

LGV

pmpH

L1

AY184167

377–438

LGV-F: CTG TGC CAA CCT CAT CAT CAA

L2

AY184168

LGV-R: AGA CCC TTT CCG AGC ATC ACT

L3

AY184169

LGV-P: HEX-CCG CCT GCT CCA ACA GTT AGT GAT G- BHQ1

K+

GAPDH

-

BT006893

152–221

Gap-F: CCA CCC ATG GCA AAT TCC

Gap-R: ATG GGA TTT CCA TTG ATG ACA AG

Gap-P: FAM- TGG CAC CGT CAA GGC TGA GAA CG- BHQ1

L1

omp1

L1

DQ064294

449–532

L1-F: CAG CAT CTT TCA ACT TAG TTG GGT TA

L1-R: AGC TCA TAT TTG GTA CAG CAT CCT T

L1-P: HEX-TCG GAG ATA ATG AAA ATC AAA GCA CGG TCA-BHQ1

L2

L2

DQ064295

449–542

L2-F: CAG CAT CTT TCA ACT TAG TTG GGT TAT

L2-R: TGA TCT AAG CTC ATA TTT GGT ACA AGC TTA

L2-P: FAM-CGG AGA TAA TGA GAA CCA TGC TAC AGT TTC AGA-BHQ1

L3

L3

DQ064296

456–544

L3-F: CGC TTC CTT CAA CTT AGT TGG ATT

L3-R: TCA AAG CAG TGT TAG GAA CAA GCT

L3-P: TET-TTC GGA ACA AAA ACA CAA TCT ACT AAC TTT AAT ACA GCG-BHQ1

L123

omp1

L2

DQ064295

388–542

L123-F : TTG GGA TCG TTT TGA TGT ATT CTG TA

L2-R: TGA TCT AAG CTC ATA TTT GGT ACA AGC TTA

IK-C

ninja

-

AB110070

2035–2080

IK-C-F: AGT AAC CAA CAC GCA TGC TGATT GCA GCT TCG CCA CAG GA^a

IK-C-R: AGT AAC CCA TAC GCA TGC TGA T GATGCCTCTTCACATTGCTCC^a