PCR | Gene | SV | Acc-No. | Region/nt | Primer/Probe (5' - 3') |
---|---|---|---|---|---|
CT-F: GGT TTC GGC GGA GAT CCT | |||||
CT | omp1 | all (I) | (AF063200) | 124–193 | CT-R1: AGT AAC CAA CAC GCA TGC TGA T |
CT-R2: AGT AAC CCA TAC GCA TGC TGA T | |||||
CT-P: FAM-CTTGCACCACTTGGTGTGACGC-TAMRA | |||||
IK_CT | ninja | - | AB110070 | 2079–2051 | Dros-P: TexRed-ATG CCT CTT CAC ATT GCT CCA CCT TTC CT-BHQ1 |
LGV | pmpH | L1 | AY184167 | 377–438 | LGV-F: CTG TGC CAA CCT CAT CAT CAA |
L2 | AY184168 | LGV-R: AGA CCC TTT CCG AGC ATC ACT | |||
L3 | AY184169 | LGV-P: HEX-CCG CCT GCT CCA ACA GTT AGT GAT G- BHQ1 | |||
K+ | GAPDH | - | BT006893 | 152–221 | Gap-F: CCA CCC ATG GCA AAT TCC |
Gap-R: ATG GGA TTT CCA TTG ATG ACA AG | |||||
Gap-P: FAM- TGG CAC CGT CAA GGC TGA GAA CG- BHQ1 | |||||
L1 | omp1 | L1 | DQ064294 | 449–532 | L1-F: CAG CAT CTT TCA ACT TAG TTG GGT TA |
L1-R: AGC TCA TAT TTG GTA CAG CAT CCT T | |||||
L1-P: HEX-TCG GAG ATA ATG AAA ATC AAA GCA CGG TCA-BHQ1 | |||||
L2 | L2 | DQ064295 | 449–542 | L2-F: CAG CAT CTT TCA ACT TAG TTG GGT TAT | |
L2-R: TGA TCT AAG CTC ATA TTT GGT ACA AGC TTA | |||||
L2-P: FAM-CGG AGA TAA TGA GAA CCA TGC TAC AGT TTC AGA-BHQ1 | |||||
L3 | L3 | DQ064296 | 456–544 | L3-F: CGC TTC CTT CAA CTT AGT TGG ATT | |
L3-R: TCA AAG CAG TGT TAG GAA CAA GCT | |||||
L3-P: TET-TTC GGA ACA AAA ACA CAA TCT ACT AAC TTT AAT ACA GCG-BHQ1 | |||||
L123 | omp1 | L2 | DQ064295 | 388–542 | L123-F : TTG GGA TCG TTT TGA TGT ATT CTG TA |
L2-R: TGA TCT AAG CTC ATA TTT GGT ACA AGC TTA | |||||
IK-C | ninja | - | AB110070 | 2035–2080 | IK-C-F: AGT AAC CAA CAC GCA TGC TGATT GCA GCT TCG CCA CAG GAa |
IK-C-R: AGT AAC CCA TAC GCA TGC TGA T GATGCCTCTTCACATTGCTCCa |