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Table 2 Detailed results of clustering for the five largest spoligotype clusters with combined spoligotyping – 5 VNTR loci genotyping.

From: Use of cluster-graphs from spoligotyping data to study genotype similarities and a comparison of three indices to quantify recent tuberculosis transmission among culture positive cases in French Guiana during a eight year period

Spoligotype

N

Number of different VNTR

Number of isolates/cluster

Individual patterns

ST 53

39

14

6, 5, 5, 4, 4, 3, 2, 2, 2, 2

4

ST 50

42

8

24, 7, 4, 2, 2

3

ST 42

10

7

3, 2

5

ST 64

13

4

9, 2

2

ST 02

15

2

11,4

0

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BMC Infectious Diseases

ISSN: 1471-2334

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