Gene number: | Fold change in expression | Putative gene function: |
---|---|---|
Antimicrobial resistance | ||
upregulated | Â | Â |
BCAL1675 | 2.67 | multidrug efflux system transporter protein AmrB |
BCAM0200 | 2.20 | efflux system transport protein |
BCAM0791 | 2.11 | Major Facilitator Superfamily protein |
BCAM0792 | 2.45 | efflux system transport protein |
BCAM1362 | 2.06 | putative penicillin-binding protein |
BCAM1947 | 3.76 | putative quinoxaline efflux system transport protein |
BCAS0034 | 19.84 | metallo-beta-lactamase superfamily protein |
downregulated | ||
BCAL0704 | 2.61 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein precursor) |
BCAL1510 | 2.72 | putative multidrug resistance transporter protein |
BCAL1813 | 2.37 | multidrug efflux system outer membrane protein |
BCAL2832 | 2.07 | D-alanyl-D-alanine carboxypeptidase/endopeptidase (penicillin-binding protein precursor) |
BCAL3511 | 2.08 | multidrug resistance transporter protein |
BCAL3514 | 2.11 | outer membrane efflux protein |
BCAS0015 | 2.09 | efflux system transport protein |
Iron uptake & metabolism | ||
upregulated | ||
BCAL0270 | 35.59 | ferric reductase-like transmembrane component |
BCAL0273 | 8.23 | protein CyaY |
BCAM2231 | 2.86 | transcriptional regulator PchR |
BCAM2232 | 2.11 | putative pyochelin biosynthetic protein PchD |
downregulated | ||
BCAL2812 | 2.59 | putative Fur family transcriptional regulator |
BCAL3201 | 2.59 | putative TolR-related protein |
BCAL3203 | 2.18 | putative periplasmic TolB protein |
BCAL3204 | 2.67 | putative OmpA family lipoprotein |
Protection against reactive oxygen and nitrogen species | ||
upregulated | ||
BCAL1766 | 2.23 | OsmC-like protein |
BCAM1676 | 19.99 | putative nitrite/sulfite reductase |
BCAM1677 | 26.75 | conserved hypothetical protein |
BCAM2753 | 8.00 | putative organic hydroperoxide resistance protein, ohr gene |
Downregulated (none) | ||
Motility and adherence | ||
upregulated | ||
BCAL0124 | 2.02 | flagellar regulon master regulator subunit FlhD |
BCAL0525 | 2.17 | flagellar M-ring protein FliF |
BCAL0527 | 2.34 | flagellar protein FliS |
BCAL3506 | 2.58 | flagellar motor switch protein FliM |
BCAM0987 | 2.69 | flagellar hook protein 2 FlgE2 |
BCAM2143 | 2.33 | cable pilus associated adhesin protein |
BCAS0299 | 3.55 | flp type pilus subunit |
downregulated | ||
BCAL3504 | 3.31 | flagellar protein FliO |
BCAM2758 | 2.35 | two-component regulatory system, sensor kinase protein |
BCAM2759 | 3.73 | putative minor pilin and initiator |
BCAM2761 | 2.53 | giant cable pilus |
BCAM2762 | 2.81 | giant cable pilus chaperone protein |
BCAS0301 | 2.03 | putative flp type pilus leader peptidase |
Secretion | ||
upregulated | ||
BCAL0849 | 3.39 | metallo peptidase, subfamily M48B |
BCAL3517 | 2.36 | type II secretion system protein L |
BCAM2040 | 2.98 | type III secretion system protein |
BCAM2042 | 2.16 | type III secretion system protein |
BCAS0196 | 3.25 | putative polygalacturonase |
BCAS0409 | 6.36 | zinc metalloprotease ZmpA |
downregulated | ||
BCAL3515 | 2.62 | type II secretion system protein N |
BCAL3521 | 3.19 | type II secretion system protein I |
BCAL3522 | 2.21 | type II secretion system protein H |
BCAM0240 | 2.47 | N-acylhomoserine lactone dependent regulatory protein |
Selected gene clusters | ||
upregulated | Â | Â |
BCAL0269 | 20.82 | putative oxidoreductase |
BCAL0270 | 35.59 | ferric reductase-like transmembrane component |
BCAL1106 | 90.32 | cytochrome b561 family protein |
BCAL1107 | 65.79 | putative oxidoreductase |
BCAL1153 | 3.30 | putative salicylaldehyde/benzaldehyde dehydrogenase |
BCAL1156 | 2.02 | putative 4-hydroxybenzoate transporter |
BCAL1157 | 2.51 | putative monooxygenase |
BCAM1676 | 19.99 | putative nitrite/sulfite reductase |
BCAM1677 | 26.75 | conserved hypothetical protein |
BCAM2749 | 31.39 | carboxymuconolactone decarboxylase family protein |
BCAM2750 | 14.06 | putative exported protein |
BCAM2751 | 7.13 | LysR family regulatory protein |
BCAM2752 | 12.35 | NAD dependent epimerase/dehydratase family protein |
BCAM2753 | 8.00 | putative organic hydroperoxide resistance protein |
BCAM2754 | 10.46 | putative ketoreductase |
downregulated | ||
BCAL1130 | 2.10 | conserved hypothetical protein |
BCAL1161 | 2.46 | conserved hypothetical protein |
BCAL1162 | 2.30 | TetR family regulatory protein |
BCAL1165 | 5.59 | conserved hypothetical protein |
BCAL1166 | 4.07 | conserved hypothetical protein |
BCAL1168 | 3.06 | conserved hypothetical protein |
BCAL1169 | 2.05 | conserved hypothetical protein (pseudogene) |
BCAL3104 | 8.00 | urease gamma subunit |
BCAL3105 | 2.22 | urease beta subunit |
BCAL3106 | 2.34 | urease alpha subunit |
BCAL3109 | 2.42 | urease accessory protein |
BCAM0066 | 5.13 | putative lipoprotein |
BCAM0067 | 14.47 | putative short chain dehydrogenase |
BCAM0068 | 11.74 | Major Facilitator Superfamily protein |
BCAM0069 | 21.83 | conserved hypothetical protein |
BCAM0070 | 15.46 | putative hydrolase |
BCAM0071 | 11.11 | puatative mandelate racemase lactonizing enzyme |
BCAM0072 | 16.58 | putative thiamine pyrophosphate enzyme |
BCAM0073 | 6.85 | hypothetical protein |
BCAM0074 | 9.43 | conserved hypothetical protein |