TY - JOUR AU - Köser, C. U. AU - Holden, M. T. AU - Ellington, M. J. AU - Cartwright, E. J. AU - Brown, N. M. AU - Ogilvy-Stuart, A. L. AU - Hsu, L. Y. AU - Chewapreecha, C. AU - Croucher, N. J. AU - Harris, S. R. AU - Sanders, M. AU - Enright, M. C. AU - Dougan, G. AU - Bentley, S. D. AU - Parkhill, J. AU - Fraser, L. J. AU - Betley, J. R. AU - Schulz-Trieglaff, O. B. AU - Smith, G. P. AU - Peacock, S. J. PY - 2012 DA - 2012// TI - Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak JO - N Engl J Med VL - 366 UR - https://doi.org/10.1056/NEJMoa1109910 DO - 10.1056/NEJMoa1109910 ID - Köser2012 ER - TY - JOUR AU - Huang, S. S. AU - Yokoe, D. S. AU - Stelling, J. AU - Placzek, H. AU - Kulldorff, M. AU - Kleinman, K. AU - O’Brien, T. F. AU - Calderwood, M. S. AU - Vostok, J. AU - Dunn, J. AU - Platt, R. PY - 2010 DA - 2010// TI - Automated detection of infectious disease outbreaks in hospitals: a retrospective cohort study JO - PLoS Med VL - 7 UR - https://doi.org/10.1371/journal.pmed.1000238 DO - 10.1371/journal.pmed.1000238 ID - Huang2010 ER - TY - JOUR AU - Craven, D. E. AU - Shapiro, D. S. PY - 2006 DA - 2006// TI - Staphylococcus aureus: times, they are a-changin’ JO - Clin Infect Dis VL - 42 UR - https://doi.org/10.1086/498907 DO - 10.1086/498907 ID - Craven2006 ER - TY - JOUR AU - Mellmann, A. AU - Friedrich, A. W. AU - Rosenkötter, N. AU - Rothgänger, J. AU - Karch, H. AU - Reintjes, R. AU - Harmsen, D. PY - 2006 DA - 2006// TI - Automated DNA sequence-based early warning system for the detection of methicillin-resistant Staphylococcus aureus outbreaks JO - PLoS Med VL - 3 UR - https://doi.org/10.1371/journal.pmed.0030033 DO - 10.1371/journal.pmed.0030033 ID - Mellmann2006 ER - TY - STD TI - SaTScan software for the spatial and space-time scan statistic. http://www.satscan.org/, UR - http://www.satscan.org/ ID - ref5 ER - TY - JOUR AU - Pearl, D. L. AU - Louie, M. AU - Chui, L. AU - Doré, K. AU - Grimsrud, K. M. AU - Leedell, D. AU - Martin, S. W. AU - Michel, P. AU - Svenson, L. W. AU - McEwen, S. A. PY - 2006 DA - 2006// TI - The use of outbreak information in the interpretation of clustering of reported cases of Escherichia coli 0157 in space and time in Alberta, Canada, 2000–2002 JO - Epidemiol Infect VL - 134 UR - https://doi.org/10.1017/S0950268805005741 DO - 10.1017/S0950268805005741 ID - Pearl2006 ER - TY - JOUR AU - Guerin, M. T. AU - Martin, S. W. AU - Darlington, G. A. AU - Rajic, A. PY - 2005 DA - 2005// TI - A temporal study of Salmonella serovars in animals in Alberta between 1990 and 2001 JO - Can J Vet Res VL - 69 ID - Guerin2005 ER - TY - JOUR AU - Sauders, B. D. AU - Fortes, E. D. AU - Morse, D. L. AU - Dumas, N. AU - Kiehlbauch, J. A. AU - Schukken, Y. AU - Hibbs, J. R. AU - Wiedmann, M. PY - 2003 DA - 2003// TI - Molecular subtyping to detect human listeriosis clusters JO - Emerg Infect Dis VL - 9 UR - https://doi.org/10.3201/eid0906.020702 DO - 10.3201/eid0906.020702 ID - Sauders2003 ER - TY - JOUR AU - Torabi, M. AU - Rosychuk, R. J. PY - 2011 DA - 2011// TI - An examination of five spatial disease clustering methodologies for the identification of childhood cancer clusters in Alberta, Canada JO - Spat Spatiotemporal Epidemiol VL - 2 UR - https://doi.org/10.1016/j.sste.2011.10.003 DO - 10.1016/j.sste.2011.10.003 ID - Torabi2011 ER - TY - JOUR AU - Jennings, J. M. AU - Curriero, F. C. AU - Celentano, D. AU - Ellen, J. M. PY - 2005 DA - 2005// TI - Geographic identification of high gonorrhea transmission areas in Baltimore, Maryland JO - Am J Epidemiol VL - 161 UR - https://doi.org/10.1093/aje/kwi012 DO - 10.1093/aje/kwi012 ID - Jennings2005 ER - TY - JOUR AU - Goetghebeur, M. AU - Landry, P. A. AU - Han, D. AU - Vicente, C. PY - 2007 DA - 2007// TI - Methicillin-resistant Staphylococcus aureus: a public health issue with economic consequences JO - Can J Infect Dis Med Microbiol VL - 18 ID - Goetghebeur2007 ER - TY - JOUR AU - Kim, T. AU - Oh, P. I. AU - Simor, A. E. PY - 2001 DA - 2001// TI - The economic impact of methicillin-resistant Staphylococcus aureus in Canadian hospitals JO - Infect Control Hosp Epidemiol VL - 22 UR - https://doi.org/10.1086/501871 DO - 10.1086/501871 ID - Kim2001 ER - TY - JOUR AU - Kulldorff, M. AU - Heffernan, R. AU - Hartman, J. AU - Assunção, R. AU - Mostashari, F. PY - 2005 DA - 2005// TI - A space-time permutation scan statistic for disease outbreak detection JO - PLoS Med VL - 2 UR - https://doi.org/10.1371/journal.pmed.0020059 DO - 10.1371/journal.pmed.0020059 ID - Kulldorff2005 ER - TY - STD TI - Public Health Ontario. http://www.publichealthontario.ca/en/eRepository/PIDAC-IPC_Annex_A_Screening_Testing_Surveillance_AROs_2013.pdf, UR - http://www.publichealthontario.ca/en/eRepository/PIDAC-IPC_Annex_A_Screening_Testing_Surveillance_AROs_2013.pdf ID - ref14 ER - TY - BOOK PY - 2009 DA - 2009// TI - Performance Standards for Antimicrobial Susceptibility Testing;19th Informational Supplement M100-S19 PB - Wayne CY - PA, USA ID - ref15 ER - TY - JOUR AU - Shopsin, B. AU - Gomez, M. AU - Montgomery, S. O. AU - Smith, D. H. AU - Waddington, M. AU - Dodge, D. E. AU - Bost, D. A. AU - Riehman, M. AU - Naidich, S. AU - Kreiswirth, B. N. PY - 1999 DA - 1999// TI - Evaluation of protein A gene polymorphic region DNA sequencing for typing Staphylococcus aureus strains JO - J Clin Microbiol VL - 37 ID - Shopsin1999 ER - TY - STD TI - eGenomics. http://tools.egenomics.com, UR - http://tools.egenomics.com ID - ref17 ER - TY - STD TI - Ridom SpaServer. http://www.spaserver.ridom.de, UR - http://www.spaserver.ridom.de ID - ref18 ER - TY - JOUR AU - Golding, G. R. AU - Campbell, J. L. AU - Spreitzer, D. J. AU - Veyhl, J. AU - Surynicz, K. AU - Simor, A. AU - Mulvey, M. R. PY - 2008 DA - 2008// TI - A preliminary guideline for the assignment of methicillin-resistant Staphylococcus aureus to a Canadian pulsed-field gel electrophoresis epidemic type using spa typing JO - Can J Infect Dis Med Microbiol VL - 19 ID - Golding2008 ER - TY - JOUR AU - Rankin, S. AU - Roberts, S. AU - O’Shea, K. AU - Maloney, D. AU - Lorenzo, M. AU - Benson, C. E. PY - 2005 DA - 2005// TI - Panton valentine leukocidin (PVL) toxin positive MRSA strains isolated from companion animals JO - Vet Microbiol VL - 108 UR - https://doi.org/10.1016/j.vetmic.2005.02.013 DO - 10.1016/j.vetmic.2005.02.013 ID - Rankin2005 ER - TY - JOUR AU - Tenover, F. C. AU - Tickler, I. A. AU - Goering, R. V. AU - Kreiswirth, B. N. AU - Mediavilla, J. R. AU - Persing, D. H. PY - 2012 DA - 2012// TI - Characterization of nasal and blood culture isolates of methicillin-resistant Staphylococcus aureus from patients in United States hospitals JO - Antimicrob Agents Chemother VL - 56 UR - https://doi.org/10.1128/AAC.05804-11 DO - 10.1128/AAC.05804-11 ID - Tenover2012 ER - TY - CHAP AU - Dohoo, I. R. AU - Martin, W. AU - Stryhn, H. PY - 2012 DA - 2012// TI - Model-building strategies BT - Methods in Epidemiologic Research PB - AVC, Inc CY - Charlottetown, Prince Edward Island ID - Dohoo2012 ER - TY - CHAP AU - Dohoo, I. R. AU - Martin, W. AU - Stryhn, H. PY - 2012 DA - 2012// TI - Confounding: Detection and Control BT - Methods in Epidemiologic Research PB - AVC, Inc CY - Charlottetown, Prince Edward Island ID - Dohoo2012 ER - TY - CHAP PY - 2007 DA - 2007// TI - xtnbreg BT - Stata 10 Base Reference Manual PB - Stata Press CY - College Station, Texas ID - ref24 ER - TY - JOUR AU - Hall, A. J. AU - Bixler, D. AU - Haddy, L. E. PY - 2009 DA - 2009// TI - Multiclonal outbreak of methicillin-resistant Staphylococcus aureus infections on a collegiate football team JO - Epidemiol Infect VL - 137 UR - https://doi.org/10.1017/S095026880800068X DO - 10.1017/S095026880800068X ID - Hall2009 ER - TY - JOUR AU - Cuny, C. AU - Schassan, H. H. AU - Witte, W. PY - 1993 DA - 1993// TI - Outbreak of nosocomial infections with two different MRSA strains involved: significance of genomic DNA fragment patterns in strains otherwise difficult to type JO - Epidemiol Infect VL - 111 UR - https://doi.org/10.1017/S0950268800056673 DO - 10.1017/S0950268800056673 ID - Cuny1993 ER - TY - JOUR AU - Kuhn, G. AU - Francioli, P. AU - Blanc, D. S. PY - 2007 DA - 2007// TI - Double-locus sequence typing using clfB and spa, a fast and simple method for epidemiological typing of methicillin-resistant Staphylococcus aureus JO - J Clin Microbiol VL - 45 UR - https://doi.org/10.1128/JCM.01457-06 DO - 10.1128/JCM.01457-06 ID - Kuhn2007 ER - TY - JOUR AU - Harris, S. R. AU - Feil, E. J. AU - Holden, M. T. AU - Quail, M. A. AU - Nickerson, E. K. AU - Chantratita, N. AU - Gardete, S. AU - Tavares, A. AU - Day, N. AU - Lindsay, J. A. AU - Edgeworth, J. D. AU - de Lencastre, H. AU - Parkhill, J. AU - Peacock, S. J. AU - Bentley, S. D. PY - 2010 DA - 2010// TI - Evolution of MRSA during hospital transmission and intercontinental spread JO - Science VL - 327 UR - https://doi.org/10.1126/science.1182395 DO - 10.1126/science.1182395 ID - Harris2010 ER - TY - JOUR AU - Harris, S. R. AU - Cartwright, E. J. AU - Török, M. E. AU - Holden, M. T. AU - Brown, N. M. AU - Ogilvy-Stuart, A. L. AU - Ellington, M. J. AU - Quail, M. A. AU - Bentley, S. D. AU - Parkhill, J. AU - Peacock, S. J. PY - 2013 DA - 2013// TI - Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study JO - Lancet Infect Dis VL - 13 UR - https://doi.org/10.1016/S1473-3099(12)70268-2 DO - 10.1016/S1473-3099(12)70268-2 ID - Harris2013 ER - TY - JOUR AU - Kahl, B. C. AU - Mellmann, A. AU - Deiwick, S. AU - Peters, G. AU - Harmsen, D. PY - 2005 DA - 2005// TI - Variation of the polymorphic region X of the protein A gene during persistent airway infection of cystic fibrosis patients reflects two independent mechanisms of genetic change in Staphylococcus aureus JO - J Clin Microbiol VL - 43 UR - https://doi.org/10.1128/JCM.43.1.502-505.2005 DO - 10.1128/JCM.43.1.502-505.2005 ID - Kahl2005 ER - TY - STD TI - Health Quality Ontario. http://www.hqontario.ca/public-reporting/patient-safety, UR - http://www.hqontario.ca/public-reporting/patient-safety ID - ref31 ER - TY - STD TI - Health Quality Ontario. http://www.hqontario.ca/public-reporting/patient-safety/information-about-patient-safety-quality-indicators, UR - http://www.hqontario.ca/public-reporting/patient-safety/information-about-patient-safety-quality-indicators ID - ref32 ER - TY - JOUR AU - Daneman, N. AU - Stukel, T. A. AU - Ma, X. AU - Vermeulen, M. AU - Guttmann, A. PY - 2012 DA - 2012// TI - Reduction in Clostridium difficile infection rates after mandatory hospital public reporting: findings from a longitudinal cohort study in Canada JO - PLoS Med VL - 7 UR - https://doi.org/10.1371/journal.pmed.1001268 DO - 10.1371/journal.pmed.1001268 ID - Daneman2012 ER - TY - JOUR AU - Chai, L. Y. AU - Ng, T. M. AU - Habib, A. G. AU - Singh, K. AU - Kumarasinghe, G. AU - Tambyah, P. A. PY - 2005 DA - 2005// TI - Paradoxical increase in methicillin-resistant Staphylococcus aureus acquisition rates despite barrier precautions and increased hand washing compliance during an outbreak of severe acute respiratory syndrome JO - Clin Infect Dis VL - 40 UR - https://doi.org/10.1086/427150 DO - 10.1086/427150 ID - Chai2005 ER - TY - JOUR AU - Yap, F. H. AU - Gomersall, C. D. AU - Fung, K. S. AU - Ho, P. L. AU - Ho, O. M. AU - Lam, P. K. AU - Lam, D. T. AU - Lyon, D. J. AU - Joynt, G. M. PY - 2004 DA - 2004// TI - Increase in methicillin-resistant Staphylococcus aureus acquisition rate and change in pathogen pattern associated with an outbreak of severe acute respiratory syndrome JO - Clin Infect Dis VL - 39 UR - https://doi.org/10.1086/422641 DO - 10.1086/422641 ID - Yap2004 ER - TY - STD TI - Centers for Disease Control and Prevention. http://www.cdc.gov/flu/about/season/flu-season.htm, UR - http://www.cdc.gov/flu/about/season/flu-season.htm ID - ref36 ER - TY - JOUR AU - Wilkinson, K. AU - Mitchell, R. AU - Taylor, G. AU - Amihod, B. AU - Frenette, C. AU - Gravel, D. AU - McGeer, A. AU - Suh, K. N. AU - Wong, A. PY - 2012 DA - 2012// TI - Laboratory-confirmed pandemic H1N1 influenza in hospitalized adults: findings from the Canadian Nosocomial Infections Surveillance Program, 2009–2010 JO - Infect Control Hosp Epidemiol VL - 33 UR - https://doi.org/10.1086/667732 DO - 10.1086/667732 ID - Wilkinson2012 ER - TY - JOUR AU - Weber, S. G. AU - Gold, H. S. AU - Hooper, D. C. AU - Karchmer, A. W. AU - Carmeli PY - 2003 DA - 2003// TI - Fluoroquinolones and the risk for methicillin-resistant Staphylococcus aureus in hospitalized patients JO - Emerg Infect Dis VL - 9 UR - https://doi.org/10.3201/eid0911.030284 DO - 10.3201/eid0911.030284 ID - Weber2003 ER - TY - JOUR AU - Monnet, D. L. AU - MacKenzie, F. M. AU - López-Lozano, J. M. AU - Beyaert, A. AU - Camacho, M. AU - Wilson, R. AU - Stuart, D. AU - Gould, I. M. PY - 2004 DA - 2004// TI - Antimicrobial drug use and methicillin-resistant Staphylococcus aureus, Aberdeen, 1996–2000 JO - Emerg Infect Dis VL - 10 UR - https://doi.org/10.3201/eid1008.020694 DO - 10.3201/eid1008.020694 ID - Monnet2004 ER - TY - JOUR AU - Van De Griend, P. AU - Herwaldt, L. A. AU - Alvis, B. AU - DeMartino, M. AU - Heilmann, K. AU - Doern, G. AU - Winokur, P. AU - Vonstein, D. D. AU - Diekema, D. PY - 2009 DA - 2009// TI - Community-associated methicillin-resistant Staphylococcus aureus, Iowa, USA JO - Emerg Infect Dis VL - 15 UR - https://doi.org/10.3201/eid1510.080877 DO - 10.3201/eid1510.080877 ID - Van De Griend2009 ER - TY - JOUR AU - Wiersma, P. AU - Tobin D’Angelo, M. AU - Daley, W. R. AU - Tuttle, J. AU - Arnold, K. E. AU - Ray, S. M. AU - Ladson, J. L. AU - Bulens, S. N. AU - Drenzek, C. L. PY - 2009 DA - 2009// TI - Surveillance for severe community-associated methicillin-resistant Staphylococcus aureus infection JO - Epidemiol Infect VL - 137 UR - https://doi.org/10.1017/S0950268809002490 DO - 10.1017/S0950268809002490 ID - Wiersma2009 ER - TY - STD TI - The pre-publication history for this paper can be accessed here:http://www.biomedcentral.com/1471-2334/14/375/prepub UR - http://www.biomedcentral.com/1471-2334/14/375/prepub ID - ref42 ER -