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Table 1 Isolates included in study with VNTR alleles

From: Multilocus variable-number tandem-repeat analysis of clinical isolates of Aspergillus flavus from Iran reveals the first cases of Aspergillus minisclerotigenesassociated with human infection

Strain designation

Morphological (molecular1) identification

Country of origin

Source

Aflatoxin production

VNTR allele size (bp)

MLV genotype

MAT allele

     

AFPM1

AFPM4

AFPM5

AFPM6

AFPM7

  

Iranian clinical and non-clinical isolates

65822

A. flavus

Iran

Sinus

Neg

122

205

215

345

256

1

 

65712

A. flavus

Iran

Sinus

Neg

122

226

213

345

256

2

 

9573

A. flavus

Iran

Sputum

Neg

122

219

215

345

193

3

 

2117

A. flavus

Iran

Nail

Neg

122

217

215

345

250

5

 

1608

A. flavus

Iran

Nail

Neg

122

195

215

345

248

7

 

65895

A. flavus

Iran

Neck

Neg

122

220

215

345

193

8

 

2037

A. flavus

Iran

Nail

Neg

122

213

213

345

239

9

 

65770

A. flavus

Iran

Sinus

Neg

122

215

215

435

245

10

 

1097

A. flavus

Iran

Nail

Neg

null

220

215

345

248

11

 

65836

A. flavus

Iran

Sinus

Neg

122

207

215

345

258

12

 

65811

A. flavus

Iran

Sinus

Neg

122

220

215

345

300

13

 

65483

A. flavus

Iran

Sinus

Neg

122

213

215

345

248

14

 

2141

A. flavus

Iran

Nail

Neg

122

220

213

345

254

15

 

65829

A. flavus

Iran

Lung

Neg

122

205

215

345

256

1

 

66041

A. flavus (A. minisclerotigenes)

Iran

Paranasal

Pos (B + trace G)

119

201

237

342

219

16

2

2165

A. flavus

Iran

Nail

Neg

122

211

213

345

256

17

 

65938

A. flavus

Iran

Sinus

Pos

122

207

215

345

254

18

 

65931

A. flavus

Iran

Sinus

Neg

122

201

213

345

256

19

 

1698

A. flavus

Iran

Nail

Neg

122

209

213

345

245

20

 

66246

A. flavus

Iran

Paranasal

Neg

122

228

215

347

263

21

 

66204

A. oryzae

Iran

Sinus

Neg

122

203

213

345

256

22

 

65760

A. flavus

Iran

Sinus

Neg

122

219

213

null

254

23

 

65838

A. flavus

Iran

Lung (ball)

Neg

122

197

213

345

241

24

 

292

A. flavus

Iran

Nail

Neg

122

211

215

345

256

25

 

2666

A. flavus

Iran

Nail

Neg

122

215

215

345

254

26

 

65817

A. flavus

Iran

Sinus

Pos

122

215

215

345

256

27

 

65728

A. flavus (?)

Iran

Sinus

Pos (B + trace G)

123

197

211

348

null

28

1

4521

A. flavus

Iran

Nail

Neg

122

215

215

345

248

29

 

2328

A. flavus

Iran

Nail

Neg

122

222

215

347

252

30

 

65805

A. flavus

Iran

Sinus

Neg

122

205

215

345

256

1

 

489

A. flavus

Iran

Nail

Neg

122

215

215

345

248

29

 

66262

A. flavus

Iran

Sinus

Neg

122

211

213

345

193

31

 

66086

A. flavus

Iran

Paranasal

Neg

122

203

213

349

246

32

 

66161

A. flavus (A. minisclerotigenes)

Iran

Sinus

Pos (B + G)

119

201

235

346

219

33

1

66150

A. flavus

Iran

Paranasal

Neg

122

205

213

345

193

34

 

66666

A. flavus

Iran

Endocard

Neg

122

195

213

345

256

35

 

1750

A. flavus

Iran

Nail

Neg

122

199

213

345

253

37

 

66137

A. flavus

Iran

Paranasal

Neg

122

209

213

345

245

20

 

65718

A. flavus

Iran

Sinus

Neg

122

225

213

346

256

38

 

64726

A. flavus

Iran

Sinus

Neg

122

215

215

345

248

29

 

64729

A. flavus

Iran

Sputum

Neg

122

195

215

345

248

7

 

65932

A. flavus

Iran

Sinus

Neg

122

195

215

345

252

39

 

65717(1)

A. flavus

Iran

Sinus

Neg

122

213

213

345

193

40

 

65717(2)2

A. flavus

Iran

Sinus

Neg

122

213

213

345

193

40

 

ES1

A. flavus

Iran

Pistachio

Neg

122

215

215

345

248

29

 

ES2

A. flavus

Iran

Pistachio

Neg

122

215

215

345

264

41

 

65841

A. flavus

Iran

Paranasal

Neg

122

218

215

345

256

44

 

65848

A. flavus

Iran

Sputum

Neg

122

217

213

345

241

45

 

TR

A. flavus

Iran

Soil

Pos

122

205

215

347

null

42

 

NTR

A. flavus

Iran

Soil

Neg

122

219

215

345

null

43

 

65806

A. flavus

Iran

Environment

Neg

122

219

215

345

193

3

 

65824

A. flavus

Iran

Environment

Neg

122

205

215

345

256

1

 

65773

A. flavus

Iran

Environment

Neg

122

219

213

347

249

46

 

66130

A. flavus

Iran

Environment

Neg

122

205

213

345

193

34

 

65844

A. flavus

Iran

Environment

Neg

122

228

213

345

256

47

 

4941

A. flavus

Iran

Environment

Neg

122

195

215

345

193

48

 

Australian clinical and non-clinical isolates

A5

A. flavus

Australia

Paranasal

Neg

122

199

213

null

239

49

 

C3

A. flavus

Australia

Ear

Neg

122

197

213

345

241

24

 

E3

A. flavus

Australia

Sputum

Neg

122

188

213

345

252

53

 

E4

A. flavus

Australia

Sputum

Neg

122

207

215

345

260

54

 

FRR 53053

A. flavus

Australia

Soil

Pos

122

196

215

344

243

50

 

FRR 5309

A. minisclerotigenes

Australia

Soil

Neg

119

186

271

342

219

51

1

FRR 5314

A. flavus

Australia

Soil

Neg

122

188

213

344

249

52

 

Type strains 3

NCPF 2008

A. flavus

Unknown

Ear

Neg

122

203

213

345

239

4

1 + 2

PTCC 5006

A. flavus (A. tamarii)

Iran

 

Neg

122

159

213

343

221

61

1

JCM 2061

A. flavus

Japan

 

Neg

122

215

213

345

244

6

1 + 2

IMI 126842

A. oryzae

USA

Chinese soy sauce

Neg

122

189

215

345

275

65

2

ATCC 15517

A. parasiticus

Japan

 

Pos

116

181

244

350

241

63

 

NRRL 255

A. parasiticus

USA

Soil

Pos

116

181

245

350

235

62

1

IMI 191303

A. sojae

Japan

 

Neg

116

181

230

363

231

64

 

A. flavus "Group II" isolates 4

FRR 2755

A. flavus (A. minisclerotigenes)

Australia

Peanuts

Neg

119

196

287

342

219

55

 

FRR 4472

A. flavus (A. minisclerotigenes)

Australia

Environment

Pos (B + G)

119

186

341

342

219

60

1

FRR 4086

A. flavus (A. minisclerotigenes)

Australia

Environment

Neg

119

186

271

342

219

66

1

LA2-5 SB

A. flavus (?)

USA

Soil

Pos (B)

119

184

215

348

235

56

1

MS22-41 SB

A. flavus (?)

USA

Soil?

Pos (B)

119

186

217

348

271

57

 

FRR 3384

A. flavus (A. minisclerotigenes)

Africa

Sunflower seeds

 

119

188

319

344

219

58

2

FRR 3382

A. flavus (A. minisclerotigenes)

Africa

Sunflower seeds

 

119

186

282

342

217

59

 

M40 No1

A. flavus (A. minisclerotigenes)

South America

Environment

Neg

119

186

303

342

219

67

1

MEA 511

A. flavus (A. minisclerotigenes)

South America

Environment

Pos (B + G)

119

186

319

342

219

68

1

MEA 352

A. flavus (A. minisclerotigenes)

South America

Environment

Pos (B + G)

119

186

267

342

219

69

1

  1. 1Molecular identification based on MLVA and on b-tubulin and calmodulin phylogeny; only listed if different to morphological identification.
  2. 2From same infection as 657 17(1).
  3. 3FRR: Food Research Laboratory, CSIRO (Australia); PTCC: Persian Type Culture Collection (Iran); JCM: Japanese Collection of Microorganisms; NCPF: National Collection of Pathogenic Fungi (UK) IMI: International Mycological Institute (UK) ATCC: American Type Culture Collection (USA); NRRL: National Regional Reference Laboratory (USA).
  4. 4VNTR data taken from [3] with 3 bp subtracted from each locus size to account for modified primers.