From: A systematic review of the epidemiology of hepatitis E virus in Africa
Genotype | Country | Year of sampling | Sample | RNA region tested | Source |
---|---|---|---|---|---|
1 | CARa | 2002 | One fecal sample from an outbreak | NAb | [34] |
Chad | 1984 | A patient with hepatitis E | Complete genome | [28] | |
 | 2004 | Five isolates from an outbreak | ORFc2 (363 ntd) | [35] | |
Egypt | 1993 | Acute hepatitis patients | ORF1 (location: 55–320) | [46] | |
 | 2006-8 | Acute hepatitis patients | ORF1 | [62] | |
 | 2012e | Sixteen isolates from acute hepatitis patients | ORF2 (189 nt) | [124] | |
Namibia | 1983 | Nine isolates from an outbreak in Kavango | ORF2 (296Â nt), 3 (188Â nt) | [88] | |
Sudan | 2004 | Twenty three isolates from an outbreak | ORF2 (363Â nt) | [35] | |
Uganda | 2007 | Internally displaced persons camp | NA | [123] | |
 | 2008 | Twenty four isolates from an outbreak | NA | [119] | |
2 | CAR | 2002 | Three fecal samples from an outbreak | NA | [34] |
Chad | 2004 | Four isolates from an outbreak | ORF2 (363Â nt) | [35] | |
Namibia | 1995 | Four isolates from NANB outbreak in Rundu | ORF2 (451 nt near 3’-end) | [87] | |
Nigeria | 2000e | Ten adult acute hepatitis patients | ORF1, 2 (3’-end) | [89] | |
3 | Egypt | 2007 | One 9Â year-old acute hepatitis patient | ORF1, 2, 2/3 | [48] |
Mayotte | 2009 | One French acute hepatitis patient (46Â yr old) | ORF2 (288Â nt) | [82] | |
Madagascar | 2008-9 | Slaughter house workers | ORF2,3 (1000Â nt) | [81] |