Skip to main content

Table 1 Primers used for protozoan gene amplification

From: Prevalence and genetic characterization of Cryptosporidium, Enterocytozoon, Giardia and Cyclospora in diarrheal outpatients in china

Genus

Gene

Sequence of primers (5´ → 3´)

Amplicon size (bp)

Cryptosporidium

SSUrRNA

CryF1: TTCTAGAGCTAATACATGCG

~1325

CryR1: CCATTTCCTTCGAAACAGGA

CryF2: GGAAGGGTTGTATTTATTAGATAAAG

~840

CryR2: CTCATAAGGTGCTGAAGGAGTA

Microsporidia

SSUrRNA

EF1: GATGGTCATAGGGATGAAGAGCTT

~1200

ER1: AATACAGGATCACTTGGATCCGT

EF2: AGGGATGAAGAGCTTCGGCTCTG

~600

ER2: AATATCCCTAATACAGGATCACT

Giardia

TPI

TPIF1: AAATIATGCCTGCTCGTCG

~605

TPIR1: CAAACCTTITCCGCAAACC

TPIF2: CCCTTCATCGGIGGTAACTT

~530

TPIR2: GTGGCCACCACICCCGTGCC

Cyclospora

18SrRNA

CYCLF1: AATGTAAAACCCTTCCAGAGTAAC

~1000

CYCLR1: GCAATA ATCTATCCCCATCACG

CYCLF2: AATTCCAGCTCCAATAGTGTAT

~500

  

CYCLR2: CAGGAGAAGCCAAGGTAGGCRTTT

Â