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Figure 1 | BMC Infectious Diseases

Figure 1

From: Superinfection with drug-resistant HIV is rare and does not contribute substantially to therapy failure in a large European cohort

Figure 1

Scheme of the analysis pipeline for detecting HIV dual infection. We assembled a control sequence set for each patient by selecting, from a large sequence dataset, the highest ranking BLAST results (closest sequence matches) to each sequence of the patient, such that the total set included 150 sequences, and each sequence of the patient was matched with the same number of control sequences. Phylogenetic trees were then constructed and analyzed for each sequence set, one tree per patient.

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