Skip to main content

Table 3 Geno2pheno [coreceptor] False Positive Rates (FPR) obtained from duplicate sequence analysis (designed A and B) of a randomly selected panel of 20 paired samples stored at +4°C (WB4) and at−20°C (WB20)

From: Stability of unfrozen whole blood DNA for remote genotypic analysis of HIV-1 coreceptor tropism

Patient

WB4 FPR-A

WB4 FPR-B

WB4 tropism

WB20 FPR-A

WB20 FPR-B

WB20 tropism

196

7.8

11.7

non-R5

7.9

6.0

non-R5

488

42.6

49.0

R5

49.0

49.0

R5

541

86.2

86.2

R5

87.4

86.2

R5

904

5.8

5.8

non-R5

5.8

5.8

non-R5

1339

10.8

10.8

R5

16.6

10.8

R5

1512

8.5

7.8

non-R5

8.5

8.5

non-R5

5012

7.8

4.8

non-R5

5.8

3.9

non-R5

5100

10.6

8.6

non-R5

12.0

12.0

R5

5656

83.0

83.0

R5

83.0

80.4

R5

6773

83.0

93.5

R5

48.4

48.4

R5

7055

1.7

1.7

non-R5

1.7

1.7

non-R5

8113

91.2

92.8

R5

92.8

92.8

R5

8800

17.1

17.1

R5

17.1

0.2

non-R5

9056

1.5

0.2

non-R5

0.1

1.6

non-R5

9746

17.8

46.7

R5

22.0

73.1

R5

9850

19.1

47.8

R5

47.8

47.8

R5

9880

94.1

95.2

R5

96.0

96.0

R5

10161

90.9

90.9

R5

90.9

90.9

R5

11659

0.1

0.5

non-R5

0.1

0.2

non-R5

11686

23.3

46.8

R5

35.3

23.3

R5