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Table 3 A comparison of detection of human papillomavirus (HPV) genotypes, classified hierarchically according to cancer risk (HPV16>HPV18>other carcinogenic HPV>non-carcinogenic HPV>HPV negative), for clinician-collected and self-collected specimens from women living in the Mississippi Delta

From: Human papillomavirus genotypes detected in clinician-collected and self-collected specimens from women living in the Mississippi Delta

   Self collected  
   HPV16 HPV18 Other Carc. Non Carc. HPV Negative Total
Clinician Collected        
HPV Negative n 5 5 23 46 155 234
  % cell 1.2% 1.2% 5.7% 11.3% 38.2  
Non Carcinogenic n 2 3 13 62 19 99
  % cell 0.5% 0.7% 3.2% 15.3% 4.7%  
Other Carcinogenic n 1 2 44 4 7 58
  % cell 0% 1% 11% 1% 2%  
HPV18 n 0 3 1 0 1 5
  % cell 0.% 0.7% 0.2% 0.0% 0.2%  
HPV16 n 4 1 2 1 2 10
  % cell 1.0% 0.2% 0.5% 0.2% 0.5%  
Total   12 14 83 113 184 406
  1. The number (n) and cell percentage (% cell) for each pairwise results is shown. The crude kappa was 0.47, percent agreement was 66%, and symmetry chi-square was p = 0.0002. Abbreviation: carc., carcinogenic.