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Table 2 rpoB mutations in M. tuberculosis from South Korea

From: Utility of the REBA MTB-rifa® assay for rapid detection of rifampicin resistant Mycobacterium Tuberculosis

Sequencing

REBA MTB-Rifa® assay

Sputum

Isolates

Total

533CTG-CCG

533CTG-CCG, ∆530-534

8

8

16

531TCG-TTG

531TCG-TTG, ∆530-534

59

115

174

531TCG-TGG

∆530-534

1

3

4

531TCG-TGC

∆530-534

1

1

2

531TCG-CAG

∆530-534

0

2

2

526CAC-TAC

∆524-529

4

14

18

526CAC-GAC

∆524-529

4

9

13

526CAC-CTC

∆524-529

2

4

6

526CAC-CCC

∆524-529

1

1

2

526CAC-CGC

∆524-529

1

2

3

526CAC-AAC

∆524-529

0

1

1

526CAC-TGC

∆524-529

0

3

3

526CAC-GGC

∆524-529

0

1

1

526CAC-TCC

∆524-529

0

1

1

522TCG-TGG

∆520-524

0

1

1

518AAC deletion

∆515-520

0

2

2

516GAC-GTC

516GAC-GTC, ∆515-520

6

18

24

516GAC-TAC

∆515-520

3

6

9

516GAC-AAC

∆515-520

0

1

1

513-514 CAA insertion

∆509-514

0

1

1

513-516 deletion

∆509-514, ∆515-520

1

1

2

514TTC-ATC

∆509-514

1

0

1

513CAA-AAA

∆509-514

1

3

4

513CAA-CTA

∆509-514

1

2

3

511CTG-CCG

∆509-514

0

3

3

511CTG-CCG, 516GAC-GGC

∆509-514, ∆515-520

1

0

1

510CAG-CAC, 511CTG-CCG

∆509-514

1

0

1

531TCG-TTG, 516GAC-TAC

531TCG-TTG, ∆530-534, ∆515-520

0

1

1

533CTG-CCG, 516GAC-GGC

533CTG-CCG, ∆530-534, ∆515-520

0

2

2

526CAC-AAC, 516GAC-AAC

∆524-529, ∆515-520

0

1

1

523GGG-GAG, 513CAA-CTA

∆520-524, ∆509-514

0

1

1

518AAC-CAC, 516GAC-GGC

∆515-520

0

1

1

516GAC-GGC, 515ATG-GTG

∆515-520

0

1

1

516GAC-GTC, 513CAA-GAA

∆515-520, ∆509-514

0

1

1

Total

 

96

211

307

  1. Bold texts are newly identified mutations in this study; ∆, missing wild type probe signal.