Skip to main content

Table 3 Predicted miRNA-mRNA interacting pairs by GroupMiR in comparison with miRNA profiling studies

From: MicroRNA regulation and its effects on cellular transcriptome in Human Immunodeficiency Virus-1 (HIV-1) infected individuals with distinct viral load and CD4 cell counts

mRNA-miRNA pairs by GroupMiR

Control vs LVL (miRNA)

Control vs HVL (miRNA)

LVL vs HVL (miRNA)

mRNA

miRNA

P value

Fold Change

P value

Fold change

P value

Fold change

P value

AIF1 (-2.67)

miR-483-5p

0.8026

5.969

0.00410**

17.088

0.000000205**

2.863

0.0125*

AIF1 (-2.67)

miR-605

0.9418

1.164

0.871

29.059

0.0000000127**

24.961

0.0000000542**

ALDH1A1 (-2.11)

miR-222

0.2438

1.710

0.229

2.558

0.0611

2.856

0.000129**

ALDH1A1 (-2.11)

miR-155

0.7276

5.183

0.0570

16.778

0.000103**

3.237

0.000000808**

NCR3 (-2.3)

miR-34a

0.1528

1.936

0.547

20.678

0.0000153**

10.681

0.000576**

NCR3 (-2.3)

miR-660

0.119

2.276

0.393

6.452

0.00778**

2.835

0.0233*

NRGN (-4.06)

miR-210

0.9606

2.931

0.162

10.536

0.000121**

3.591

0.00276**

NRGN (-4.06)

miR-564

0.9702

2.467

0.229

11.667

0.00000170**

4.730

0.00307**

IL6 (4.01)

miR-144

0.8496

−1.181

0.855

−25.7093

0.00000508**

−21.786

0.000241**

IL6 (4.01)

miR-376a

0.8812

−1.264

0.697

−2.638

0.0185*

−2.088

0.000000797**

IL6 (4.01)

miR-935

0.227

−1.706

0.378

−22.431

0.0000000179**

−13.141

0.0000135**

CCL2 (4.53)

miR-144

0.1506

−1.181

0.855

−25.709

0.00000508**

−21.786

0.000241**

CCL2 (4.53)

miR-196b

0.1026

2.167

0.121

−1.071

0.898

−2.321

0.00479**

CCL2 (4.53)

miR-376a

0.1272

−1.264

0.697

−2.638

0.0185*

−2.088

0.000000797**

CCL2 (4.53)

miR-503

0.1154

1.624

0.403

−3.256

0.0480*

−5.288

0.00788**

CCL2 (4.53)

miR-590-3P

0.1122

3.077

0.099

−2.00

0.252

−6.150

0.00000113**

CCL2 (4.53)

miR-935

0.1732

−1.706

0.378

−22.431

0.0000000179**

−13.141

0.0000135**

CCL8 (5.11)

miR-25

0.5172

−1.095

0.878

2.893

0.00117**

3.169

0.00781**

CCL8 (5.11)

miR-376a

0.119

−1.264

0.697

−2.638

0.0185*

−2.088

0.000000797**

CCL8 (5.11)

miR-512-3p

0.1184

−1.508

0.609

3.942

0.0298*

5.950

0.00829**

CCL8 (5.11)

miR-518d-3p

0.1302

−1.124

0.892

4.867

0.00491**

5.471

0.00367**

CCL8 (5.11)

miR-935

0.4236

−1.706

0.378

−22.431

0.0000000179**

−13.141

0.0000135**

  1. Fold changes and p-values for the miRNA and mRNA in infected PBMC compared to the uninfected controls determined by RealTime StatMiner. * = p < 0.05.