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Table 3 Definition of the phylogenetic sublineages of the 260M. tuberculosis isolates from Beijing.

From: Genetic diversity of Mycobacterium tuberculosis isolates from Beijing, China assessed by Spoligotyping, LSPs and VNTR profiles

Sublineage

Spoligotyping

LSP

IS6110 in NTF

 

RD105

RD181

 

G1

G1-1

Beijing family

Deletion

Intact

Ancient

G1-2

Beijing family

Deletion

Deletion

Ancient

G1-3

Beijing family

Deletion

Deletion

Modern

G2

Non-Beijing

Intact

---

---

G3

Non-Beijing

Intact

---

---

G4

Non-Beijing

Intact

---

---

  1. * In RD105 and RD181 columns, ‘1’ means the RD is intact; ‘0’ means the RD is deleted.