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Table 1 Comparison of Sanger sequencing and real-time pyrosequencing

From: SNP-based real-time pyrosequencing as a sensitive and specific tool for identification and differentiation of Rickettsia species in Ixodes ricinus ticks

Sensitivity

Copy number in initial template (2 μl)

Sanger Sequencing

real-time pyrosequencing

P-value

 

Number of identified tick samples (%)

 

<101

1/73 (1.4)

11/73 (15.1)

0.013*

101-102

5/24 (8.3)

13/24 (54.2)

0.180

>102-103

28/45 (62.2)

43/45 (95.6)

0.239

>103-104

72/74 (97.3)

74/74 (100)

0.999

>105-105

42/42 (100)

42/42 (100)

1.000

>105-106

4/4 (100)

4/4 (100)

1.000

>106

1/1 (100)

1/1 (100)

1.000

all samples

153/263 (58.2)

188/263 (71.5)

0.002*

  1. * Statistically significant.