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Table 1 Primer information

From: The development of a GeXP-based multiplex reverse transcription-PCR assay for simultaneous detection of sixteen human respiratory virus types/subtypes

Primer

Sequence 5’-3’

Gene

Size (bp)

FluA F

AGGTGACACTATAGAATATTCTAACCGAGGTCGAAACG

M

270

FluA R

GTACGACTCACTATAGGGAACAAAGCGTCTACGCTGCAG

FLuB F

AGGTGACACTATAGAATAAAAAGRAGATTCATCACAGAGC

M

166

FLuB R

GTACGACTCACTATAGGGATTCTGCTATTTCAAATGCTTCA

sH1N1 F

AGGTGACACTATAGAATAGGTATGCTTTTGCAMTGARTAGAGG

HA

250

sH1N1 R

GTACGACTCACTATAGGGAAAGGGATATTCCTTARTCCTGTARCCAT

PIV1 F

AGGTGACACTATAGAATATCTCATTATTACCYGGACCAA

HA

284

PIV1 R

GTACGACTCACTATAGGGATCCTGTTGTCGTTGATGTCATA

PIV2 F

AGGTGACACTATAGAATATCTACACTGCATCAGCCAGC

HA

194

PIV2 R

GTACGACTCACTATAGGGACCCCTAAAAGAGATGAGCCC

PIV3 F

AGGTGACACTATAGAATATTGTCAATTATGATGGYTCAATCT

HA

230

PIV3 R

GTACGACTCACTATAGGGAGACACCCAGTTGTGTTGCAG

HRV F

AGGTGACACTATAGAATACCCCTGAATGYGGCTAACCT

5' UTR

144

HRV R

GTACGACTCACTATAGGGACGGACACCCAAAGTAGTYGGT

HMPV F1

AGGTGACACTATAGAATACATGCCCACTATAAAAGGTCAG

L

208

HMPV R1

GTACGACTCACTATAGGGACACCCCAGTCTTTCTTGAAA

HMPV F2

AGGTGACACTATAGAATAGAGCTAAYAGAGTGCTAAGTGATG

N

208

HMPV R2

GTACGACTCACTATAGGGAACTTTCTGCTTTGCTTCCTGT

Adv F

AGGTGACACTATAGAATAGCCSCARTGGKCWTACATGCACATC

Hexon

338

Adv R

GTACGACTCACTATAGGGACAGCACSCCICGRATGTCAAA

NL63 F

AGGTGACACTATAGAATATCCCAAATGTGATAGAGCTTTGC

Polym-erase

176

NL63 R

GTACGACTCACTATAGGGACTGTTAAAACTTGTGCCAACTC

OC43 F

AGGTGACACTATAGAATAATTGCACCAGGAGTCCCA

N

200

OC43 R

GTACGACTCACTATAGGGATATCGGTGCCGTACTGGTCT

229E F

AGGTGACACTATAGAATACTCGGAATCCTTCAAGTGACAGA

N

183

229E R

GTACGACTCACTATAGGGAACGAGAAGGCTTAGGAGTAC

HKU1 F

AGGTGACACTATAGAATATATAGTRAAACCTGATATGGCT

N

220

HKU1 R

GTACGACTCACTATAGGGATACCAAAACACTGTTGAACAT

RSVA F

AGGTGACACTATAGAATACATCCCCTCTATGCACAACC

F

158

RSVA R

GTACGACTCACTATAGGGACATGTTTCAGCTTGTGGGAA

RSVB F

AGGTGACACTATAGAATAAAACGAAGATTTCTGGGCTTC

F

279

RSVB R

GTACGACTCACTATAGGGATGCGACAGCTCTGTTGATTT

HBoV F

AGGTGACACTATAGAATAAAGAAAAGGGAGTCCAGAA

NP1

290

HBoV R

GTACGACTCACTATAGGGACTCTGTGTTGACTGAATACAG

Rnasep F

AGGTGACACTATAGAATAGAGGCCTGGCTTTTGAACTT

RNase P

125

Rnasep R

GTACGACTCACTATAGGGAATCAAATTGAGGGCACTGGA

Tag F

AGGTGACACTATAGAATA

  

Tag R

GTACGACTCACTATAGGGA

  
  1. a The primers HMPV F1 and HMPV R1 were reported previously [14]; the primers Adv F and Adv R were reported previously [15]; the primer HBoV R was reported previously [16]. The Universal Tag sequences are underlined.