Table 1 Oligonucleotide sequences of primers used
From: Genetic variation of Mycobacterium tuberculosis circulating in Kharkiv Oblast, Ukraine
Primer name | Nucleotide structure |
|---|---|
ETRA1 | 5'-GATTGAGGGGATCGTGATTGG-3' |
ETRA2 | 5'-CAGCTAGGCACTCCTGAGATTCC-3' |
ETRB1 | 5'-BGCGAACACCAGGACAGCATCATG |
ETRB2 | 5'-GGCATGCCGGTGATCGAGTGG |
ETRC1 | 5'-CCTTATGCTTTGCCTGTTTGACC-3' |
ETRC2 | 5'-TGTTCGGGGTGAGAAGATCG-3' |
MIRU02U | 5'-CAGGACACGGGTTCTACTG-3' |
MIRU02R | 5'-GGACTAGGTCGAGGTTGTGTC-3' |
MIRU04U | 5'-CAGGTCACAACGAGAGGAAGAGC |
MIRU04R | 5'-GCGGATCGGCCAGCGACTCCTC |
MIRU10U | 5'-GACTTCCAACAGCACCGTCTTATC-3' |
MIRU10R | 5'-TCGCACCGATCACGCTACG-3' |
MIRU16U | 5'-GTTGGAAACGGCGGTTATTGAC-3' |
MIRU16R | 5'-CGGAGTCGTCCAGCAAGACC-3' |
MIRU20U | 5'-TCGGAGAGATGCCCTTCGAGTTAG -3' |
MIRU20R | 5'-TCACGGTCTCCGCACTAACG-3' |
MIRU23U | 5'-CTCACCAGGATCGCCAAACC-3' |
MIRU23R | 5'-TCTGACTCATGGTGTCCAACC-3' |
MIRU24U | 5'-GCTTGTGCGGGAAGGCTA-3' |
MIRU24R | 5'-CGATCGCGGATCTTTGCT-3' |
MIRU26U | 5'-CCAGCAGTTGAGCACAGTTCG-3' |
MIRU26R | 5'-GGATAGGTCCGAGTTCGATTTCC-3' |
MIRU27U | 5'-CGGTGACCAACGTCAGATTC-3' |
MIRU27R | 5'-ACGTGACGGGGCATCTTC-3' |
MIRU31U | 5'-CCTTATGCTTTGCCTGTTTGACC-3' |
MIRU31R | 5'-TGTTCGGGGTGAGAAGATCG-3' |
MIRU39U | 5'-GTCAACAGACCACTAGACAAGCC-3' |
MIRU39R | 5'-GCAGCGTCCGTACTTCCG-3' |
MIRU40U | 5'-GCAAGAGCAAGAGCACCAAGC-3' |
MIRU40R | 5'-TGTCTAATCAGGTCTTTCTCTCACGC-3' |
MSPA | 5'-CGATCTGGTCGGCCCCGAAC-3' |
MSPB | 5'-TTCGTCGGGGTGTTCGTCCA-3' |
MUT531U | 5'-AAACCACAAGCGCCGAATGTC-3' |
MUT531R | 5'-TCTGATCGGCTCGCTGTC-3' |
RPOB1 | 5'-AACCGCCGCCTGCGTACGGT-3' |