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Table 1 Fragments obtained during AFLP analysis using six primer combinations in V. cholerae.

From: Amplified fragment length polymorphism of clinical and environmental Vibrio cholerae from a freshwater environment in a cholera-endemic area, India

Pair No Primersa No. of fragments analyzed Dg
   Total bandsb Monomorphicc Polymorphicd Informativee Singularf  
1. G/G 29 3 26 25 1 0.99
2. C/T 68 3 65 59 6 0.98
3. C/G 64 6 58 54 4 0.99
4. G/T 69 1 68 68 0 0.99
5. T/A 43 1 42 38 4 0.98
6. G/A 45 5 40 38 2 0.99
Total   318 19 299 282 17 0.99
  1. a Denoting EcoRI and MseI primers, each with one selective base (EcoRI-MseI +1/+1). The letters such as G/G, indicate selective bases respectively for EcoRI and MseI.
  2. b Bands scored excluding some small and large fragments at the ends of the gel.
  3. c Monomorphic refers to fragments present in all isolates.
  4. d Fragments showing variation in their patterns among all isolates.
  5. e Fragments present or absent in two or more isolates.
  6. f Fragment present or absent only in one isolate.
  7. g D-Simpson's index of diversity.