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Table 3 Subtypes or species of detected viruses

From: A molecular epidemiological study of respiratory viruses detected in Japanese children with acute wheezing illness

  

No history of wheezing and/or asthma

 

Having history of wheezing and/or asthma

Virus

No. of strains

Strain name

No. of strains

Strain name

RSV-A

25

RSV/YOK/07/14(AB551036), RSV/YOK/07/22(AB551037), RSV/YOK/07/26(AB551038), RSV/YOK/07/43(AB551039), RSV/YOK/07/51(AB551040), RSV/YOK/07/52(AB551041), RSV/YOK/07/53(AB551042), RSV/YOK/07/66(AB551044), RSV/YOK/08/79(AB551046), RSV/YOK/08/83(AB551047), RSV/YOK/08/113(AB551049), RSV/YOK/08/122(AB551053), RSV/YOK/08/123(AB551054), RSV/YOK/08/125(AB551056), RSV/YOK/08/127(AB551057), RSV/YOK/08/128(AB551058), RSV/YOK/08/130(AB551059), RSV/YOK/08/133(AB551060), RSV/YOK/08/134(AB551061), RSV/YOK/08/141(AB551065), RSV/YOK/08/142(AB551066), RSV/YOK/08/146(AB551069), RSV/YOK/08/148(AB551071), RSV/YOK/08/150(AB551072), RSV/YOK/09/162(AB551075)

2

RSV/YOK/08/73(AB551045), RSV/YOK/08/111(AB551048)

RSV-B

13

RSV/YOK/07/13(AB551078), RSV/YOK/07/16(AB551079), RSV/YOK/07/17(AB551080), RSV/YOK/07/21(AB551081), RSV/YOK/07/32(AB551083), RSV/YOK/07/33(AB551084), RSV/YOK/07/34(AB551085), RSV/YOK/07/38(AB551086), RSV/YOK/07/50(AB551092), RSV/YOK/07/56(AB551093), RSV/YOK/07/60(AB551095), RSV/YOK/07/62(AB551096), RSV/YOK/07/64(AB551097)

7

RSV/YOK/07/4(AB551076), RSV/YOK/07/59(AB551094), RSV/YOK/08/74(AB551102), RSV/YOK/08/80(AB551104), RSV/YOK/08/82(AB551105), RSV/YOK/08/84(AB551106), RSV/YOK/08/88(AB551107)

Subtotal

38

 

9

 

HRV-A

5

HRV/YOK/07/7(AB550346), HRV/YOK/07/61(AB550365), HRV/YOK/08/107(AB550377), HRV/YOK/08/110(AB550379), HRV/YOK/08/112(AB550380)

12

HRV/YOK/07/11(AB550348), HRV/YOK/07/15(AB550350), HRV/YOK/07/19(AB550352), HRV/YOK/07/24(AB550355), HRV/YOK/07/25(AB550356), HRV/YOK/07/36(AB550358), HRV/YOK/08/103(AB550374), HRV/YOK/08/131(AB550389), HRV/YOK/08/153(AB550396), HRV/YOK/08/167(AB550402), HRV/YOK/08/169(AB550403), HRV/YOK/08/171(AB550404)

HRV-B

1

HRV/YOK/08/129(AB550389)

1

HRV/YOK/08/154(AB550397)

HRV-C

6

HRV/YOK/07/5(AB550345), HRV/YOK/07/20(AB550356), HRV/YOK/07/41(AB550368), HRV/YOK/08/100(AB550379), HRV/YOK/09/163(AB550400), HRV/YOK/09/164(AB550401)

11

HRV/YOK/07/2(AB550343), HRV/YOK/07/10(AB550347), HRV/YOK/07/12(AB550349), HRV/YOK/07/18(AB550351), HRV/YOK/07/23(AB550353), HRV/YOK/07/55(AB550371), HRV/YOK/08/86(AB550377), HRV/YOK/08/106(AB550382), HRV/YOK/08/120(AB550386), HRV/YOK/08/126(AB550388), HRV/YOK/08/159(AB550398)

Subtotal

12

 

24

 

RSV-A+HRV-A

2

RSV/YOK/08/116(AB551050) + HRV/YOK/08/116(AB550381), RSV/YOK/08/145(AB551068) + HRV/YOK/08/145(AB550392)

3

RSV/YOK/07/1(AB551033) + HRV/YOK/07/1(AB550342), RSV/YOK/08/117(AB551051) + HRV/YOK/08/117(AB550382), RSV/YOK/08/119(AB551052) + HRV/YOK/08/119(AB550384)

RSV-A+HRV-B

 

ND

1

RSV/YOK/08/140(AB551064) + HRV/YOK/08/140(AB550392)

RSV-A+HRV-C

 

ND

1

RSV/YOK/07/3(AB551034) + HRV/YOK/07/3(AB550344)

RSV-B+HRV-A

2

RSV/YOK/07/42(AB551087) + HRV/YOK/07/42(AB550361), RSV/YOK/07/47(AB551090) + HRV/YOK/07/47(AB550363)

 

ND

RSV-B+HRV-B

1

RSV/YOK/08/118(AB551108) + HRV/YOK/08/118(AB550363)

 

ND

RSV-B+HRV-C

4

RSV/YOK/07/28(AB551082) + HRV/YOK/07/28(AB550365),

RSV/YOK/07/45(AB551088) + HRV/YOK/07/45(AB550405), RSV/YOK/07/46(AB551089) + HRV/YOK/07/46(AB550370),

RSV/YOK/07/67(AB551099) + HRV/YOK/07/67(AB550375)

 

ND

Subtotal

9

 

5

 

HMPV-B2

1

HMPV/YOK/07/44(AB565438)

 

ND

HPIV-1

 

ND

1

HPIV/YOK/08/115(AB565748)

Total

60

 

39

 
  1. RSV-A, Respiratory syncytial virus subgroup A;RSV-B, Respiratory syncytial virus subgroup B; HRV-A, Human rhinovirus species A; HRV-B, Human rhinovirus species B; HRV-C, Human rhinovirus species C; HMPV, Human metapneumovirus; HPIV-1, Human parainfluenza virus type 1; ND, Not detected