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Table 2 Primers for PCR used in this study

From: A molecular epidemiological study of respiratory viruses detected in Japanese children with acute wheezing illness

Virus

Primer

Sequence

Reference no.

RSV

ABG490

5'-ATGATTWYCAYTTTGAAGTGTTC-3'

[22]

 

F164

5'-GTTATGACACTGGTATACCAA CC-3'

 
 

AG655

5'-GATCYCAAACCTCAAACCAC-3'

[23]

 

BG517

5'-TTYGTTCCCTGTAGTATATGT G-3'

 

HRV

EVP4

5'-CTACTTTGGTGTCCGTGTT-3'

[24]

 

OL68-1

5'-GGTAAYTTCCACCACCANCC-3'

[25]

HMPV

hMPV-1f

5'-CTTTGGACTTAATGACAGATG-3'

[26]

 

hMPV-1r

5'-GTCTTCCTGTGCTAACTTTG-3'

 
 

hMPV-2f

5'-CATGCCGACCTCTGCAGGAC-3'

[27]

 

hMPV-2r

5'-ATGTTGCAYTCYYTTGATTG-3'

 

HPIV

PIS1+

5'-CCGGTAATTTCTCATACCTAT G-3'

[28]

 

PIS1-

5'-CTTTGGAGCGGAGTTGTTAAG-3'

 
 

PIS2+

5'-CCATTTACCTAAGTGATGGAAT-3'

 
 

PIS2-

5'-GCCCTGTTGTATTTGGAAGAGA-3'

 
 

PIS3+

5'-ACTCCCAAAGTTGATGAAAGAT-3'

 
 

PIS3-

5'-TAAATCTTGTTGTTGAGATTG-3'

 

InfV A

M30F2/08

5'-ATGAGYCTTYTAACCGAGGTCGAAACG-3'

[29]

 

M264R3/08

5'-TGGACAAANCGTCTACGCTGCAG-3'

 

InfV B

BHA1F1

5'-AATATCCACAAAATGAAG GCAATA-3'

[29]

 

BHAR1166

5'-ATCATTCCTTCCCATCCTCCTTCT-3'

 

AdV

AdnU-S'2

5'-TTCCCCATGGCNCACAAYAC-3'

[30]

 

AdnU-A2

5'-TGCCKRCTCATRGGCTGRAAGTT-3'

 

HBoV

188F

5'-GACCTCTGTAAGTACTATTAC-3'

[31]

 

542R

5'-CTCTGTGTTGACTGAATACAG-3'

 
  1. RSV: respiratory syncytial virus; HRV: human rhinovirus; HMPV: human metapneumovirus; HPIV: human parainfluenza virus; InfV A: influenza virus subtype A; Inf B: influenza virus subtype B; AdV: adenovirus; HBoV: human bocavirus